Amaranthus tricolor (tampala): 130814345
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Entry
130814345 CDS
T09367
Name
(RefSeq) beta-galactosidase 17 isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00052
Galactose metabolism
atri00511
Other glycan degradation
atri00531
Glycosaminoglycan degradation
atri00600
Sphingolipid metabolism
atri00604
Glycosphingolipid biosynthesis - ganglio series
atri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
130814345
09103 Lipid metabolism
00600 Sphingolipid metabolism
130814345
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
130814345
00604 Glycosphingolipid biosynthesis - ganglio series
130814345
00511 Other glycan degradation
130814345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atri04147
]
130814345
Enzymes [BR:
atri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
130814345
Exosome [BR:
atri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130814345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_gal-bd
BetaGal_ABD_1
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
130814345
NCBI-ProteinID:
XP_057536452
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All DBs
Position
5:complement(21255468..21270770)
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AA seq
709 aa
AA seq
DB search
MILVAKPEEGARDHLPTTTMKKKNARCFAINNFTILFSLLVFVAIFAFVAPLPSFSTPRS
RHRKKLHVRSFEIADDMFWKDGEPFRIIGGDLHYFRVLPEYWEDRLLRAKALGLNTIQTY
VPWNLHELRPGDLFFDGIANIVSFLRLCQKLDFLVMLRAGPYICAEWDLGGFPAWLLAKQ
PALKLRSSDPEYLKMVDKWWSILLPKVSPFLYGNGGPIIMVQIENEYGSYADDKAYLHHL
VKLARKHLGDDVILYTTDGGTRTTLEKGTISGGSVYSAVDFATGDQPWPIFKLQMQFNAP
GKSPPLSSEFYTGWLTHWGERIAKTDADFTANELGKILSRNGSVVLYMAHGGTNFGFFNG
ANTGSDESDYKPDLTSYDYDAPIRETGDVDNAKFRAIRRVIQQYASVTLPPVPANNEKAG
YGYVQLKKTSNLFDILGIPNNSNVVESASPIPMEFVGQMHGFLLYMSEFNTHDNASSLMI
SKVHDRAQVFISCPFNDHGGRPVYAGKVERWSNTALQLPDLKCVSKTSLYVLVENMGRIN
YGPYIADSKGILSPVYVDGHILQNWKMFSIPLSNLNDQNRSSFHQVAGSDLTTLHASKIM
QHKSKNLSNEPAFYTGYFIIDDADQVKDTFLSVAGWGKGIAFINDFNLGRYWPTFGPQCN
LYVPAPLLRHGKNTVVLFELESPNAELAVRFVQHENFSCSQTNSNVREL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgatattagtagcaaaaccagaagaaggagccagagatcatcttccgacgacaacaatg
aagaagaagaatgctcgatgtttcgccatcaataattttaccatccttttttctcttctc
gtttttgttgcgattttcgccttcgttgctcctctcccttctttctctactcctcgatcc
cgccatcgtaaaaagctgcatgtcaggagctttgagattgccgatgacatgttctggaaa
gatggtgagcctttccgcataattggtggtgatctgcattactttcgagttcttcctgag
tactgggaagataggctgttgagagcaaaagccttgggattaaatacaattcagacttat
gttccatggaatctgcatgaactaaggcctggagatctgttttttgacggtattgctaac
atagtgtcatttcttagactatgccagaagctagattttcttgtcatgcttcgagctggg
ccttacatatgtgcagagtgggatttgggtggttttccagcttggctactagctaaacag
ccagctcttaaactgaggtcttcggatcctgagtaccttaaaatggtggataagtggtgg
agcatattactcccgaaggtgtctccttttctttatggaaatggtggtcctattatcatg
gttcagatagaaaatgaatatggttcatatgcagatgataaagcttacctgcatcacctg
gtcaaactggcaaggaaacaccttggagatgacgtaatcttgtataccacagatggaggt
acaagaacaactcttgagaaaggaactatttctgggggcagtgtttattcagctgttgac
tttgcaacaggtgatcagccatggccaatttttaaattgcaaatgcaattcaatgcacct
ggaaaatctcctcctctatcatcggagttctacactggatggcttacacactggggagaa
cggattgcaaaaactgatgctgattttacagcaaacgagctgggaaagattttgtcgagg
aatggctctgtggttctttatatggcacatggcggcacaaattttggattctttaatgga
gcaaataccggttcagatgagtcagattataagcctgaccttacatcttatgattatgat
gcaccaattcgtgaaacaggtgatgtggacaatgccaaatttagagctataaggagggtt
atacagcaatatgcttcggtcactcttcctccagtacctgccaataatgaaaaggcaggt
tatggatatgtccaactcaagaaaacttcaaatttatttgatatccttggcattcccaat
aattcaaatgtagttgaatctgctagcccaattcctatggagtttgtaggccagatgcat
ggatttctactatacatgtcagaatttaatacgcatgataatgctagttccttaatgata
tcgaaggtgcatgacagagcccaagtttttatttcatgccctttcaatgaccatggagga
agacctgtttatgctggaaaagtagagagatggtccaacacagcgcttcagcttcctgat
ctcaaatgtgtttcaaaaactagtttatatgttttggttgaaaacatgggcagaattaat
tatgggccctacattgctgacagcaagggaattttgtctcctgtttatgtggatgggcat
attcttcaaaattggaaaatgttctcaattccactttccaatctgaatgatcagaatcgt
agttcctttcatcaggttgcgggtagtgacctcactacattacatgcaagcaaaattatg
cagcataagagcaagaacctctcaaatgaacctgctttttacactggttactttataatc
gatgatgctgatcaagttaaagacacatttttatcagtagctggctggggaaaagggatt
gcattcatcaacgatttcaatctaggacgatattggccgacatttgggccacagtgtaac
ctctatgtccctgctccacttttacgccatgggaaaaacacagtggtactctttgaactc
gaatcaccaaatgcagagcttgcagtcagatttgttcagcatgagaacttctcatgcagt
caaaccaactcaaacgttcgtgaactttaa
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