Amaranthus tricolor (tampala): 130817890
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Entry
130817890 CDS
T09367
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130817890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130817890
Enzymes [BR:
atri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130817890
Transcription machinery [BR:
atri03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
130817890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
130817890
NCBI-ProteinID:
XP_057539837
LinkDB
All DBs
Position
1:39093176..39121816
Genome browser
AA seq
1349 aa
AA seq
DB search
MMMLRSHNNIQFTKQPYIEDNEPRRIESINFSMFSASEISKVSEVEIFKGVYYDVQKKPI
ANGLLDPKMGPPNKSSGLCATCHAKYEDCPGHYGCLTLALPVFNIGYIGAILDVLKCICK
SCSHILLPEKECKETLKKMRNPKLDSLQKTELRKRIVKKCTSRAEVLCLRCGYLNGKVKK
GKTALQIVHNRPRQNKNDEESGGSTLSFINPHDALLLFKQMLDQDCELLYLNDRPEKLVI
TNLCVPPLSLRPSVFVDGGIQSNENDITERLKRIIQANACLLQGLQEPISSFKILDDWDY
LQVEVAQYINSDVRVALQAQQPTKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPD
PNLKITEVAVPLLMASILTYPECVNDHNKERLKQCVRNGPKKYPGARFVVETNGDKKDLS
FSIRKRIAEDLKNGCIVHRHLVDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVC
NPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGAILVASTQDFLTSAFLIT
RKDTFYDRTTFCLMCSYMGDGMDIIDLPDPAIVKPIQLWTGKQLFNVLIRPGRQLRVFVN
LMVKEKIYCKPDDRKTTCREDTMCPNDGFVYFRNSELISGQLGKATLGNGNKVGLFSVLV
RDYDPHAAASCMNRVAKLSARWIGNHGFTIGIDDVQPGKLLNEEKQFRINEGYRACDGLI
KSFNEGKLTLMPGCDAAQTLEAKITQQLNEIREIAGKVCMKELHWRNGPLIMSQCGSKGS
PINISQMVACVGQQAVGGRRAPDGFNDRSLPHFPIKSKTPSAKGFVANSFYSGLTASEFF
FHTMGGREGLVDTAVKTADTGYMSRRLMKCLEDLVVHYDMTVRNSNGTVVQFFYGDDGMD
PAQMEGAEGFPVDFERLRFKIEATCPAGRDMKLPPLEIPEIINKRFSTYGGCSDAFKKKL
FDFFENLSKRKCYISEQQLQVFLDACISRLRLKEIEAGTAIGAIGAQSIGEPGTQMTLKT
FHFAGVASMNVTLGVPRIKEIINASKKISTPIIMAKLDDDNCMDIAQTIKGQIEKTLLDQ
VAKSIKLVMTSFRASIVVKLDMVKINGSRLCINAYTVKERIEKSLAKRKSDKLNIKVLDD
DKLAVMPDADKHDAHFVLHQTKNKLPYVVVKGIDTIERAIIADEEGKKGKLNLIVEGTGL
RDVMGIQGIDGRKTESNHIIEVHQTLGIEAARSCIIREIKKVMQSHSMDVDIRHMMLLAD
VMTFKGEVLAVTRVGIAKMKESILMLASFEKTADHLFNGSVNAREEKIEGVTECIIMGVP
MQIGTGMMKIRQRIDSLPEFKYASDPIFA
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgctgcgatcgcataacaatattcaattcaccaagcagccgtatattgaggat
aatgagcctcgtcgaattgaaagcataaatttttctatgttttcggcatcagaaatcagc
aaagtttctgaagttgaaatttttaaaggagtttattacgatgttcaaaagaaacctata
gctaatggtcttttggaccctaaaatggggcctccaaacaaaagtagtggtctttgtgca
acatgtcatgcgaagtatgaagattgtccgggccattatggatgtttgactcttgcactg
cctgtttttaacattggctacattggtgctatcctagatgttttaaagtgtatatgcaag
tcttgctcacatatcctgctaccagaaaaagaatgtaaagagactttgaagaagatgaga
aaccccaagcttgattcactgcaaaaaactgagctaaggaaaaggatcgtgaagaagtgt
acctctagagctgaagtgctgtgcttgagatgtggatacttgaatggaaaggtgaaaaag
ggtaaaactgcattgcaaattgttcataatcgtccgaggcagaataaaaatgatgaagaa
agtggaggctccactctttcctttataaatcctcatgatgcattgttattatttaagcaa
atgctggatcaggattgcgagctactctatctgaatgatagacctgaaaaacttgtaatt
accaacttgtgtgttcctcctttgtccctgcgtccttctgtttttgttgatggtggaatt
caaagcaatgaaaatgacatcacagagaggttaaagagaatcatacaagcaaatgcttgc
cttcttcagggtctgcaagaaccaattagctcatttaaaatattggatgactgggattac
cttcaagttgaagtggctcaatacataaacagtgatgtacgtgttgctttacaagcccaa
caacctactaagccattgagtggatttgttcaacgtttgaaggggaaacagggacgcttt
cgtggaaatctgtctggaaagcgtgttgagttcactggaagaactgtgatatcacctgat
ccaaatttgaaaatcacagaggttgcagttccactgttaatggcatctatcttaacctat
cctgaatgtgtcaatgatcataataaagaaaggttgaagcaatgtgtgcgtaatgggcca
aagaagtatccaggtgcaaggtttgttgtagagaccaacggtgacaagaaagacttatca
ttttctattagaaaacggattgctgaagacttgaagaatggctgcatagttcatcgtcac
cttgttgatggtgatgttgttctttttaacaggcaaccaagtttgcaccgcatgtctatt
atgtgccacagggctagaataatgccttggagaactttgagattcaatgaatctgtttgc
aacccgtacaatgctgattttgatggtgatgagatgaatatgcatgttccacagacagaa
gaggcgcgaacagaggcattactgttgatgggggttcaaaacaatctatgcacgccgaaa
aatggagctattttggtcgcgtccacccaggatttcttgacatctgcttttctaattacc
aggaaggatacattttacgatcgtacaacattttgtctgatgtgttcttacatgggagac
ggaatggacatcatagatttgccagatccagcaatagttaagcctatccagctctggacg
ggtaaacaattatttaatgttctcatacgtccaggtagacaactgagagtcttcgtgaat
cttatggtgaaagagaagatatactgcaaacctgacgacaggaagacgacttgtagggag
gataccatgtgtcctaatgacggttttgtttacttccgtaatagtgaactaatatctggt
caacttggaaaagctaccttagggaatggcaataaagttgggcttttttctgttcttgtt
cgagactatgatccacatgctgctgctagttgcatgaatagagtggcaaaactaagtgct
aggtggattggtaatcatgggtttacgattggcattgatgatgtccagcccggtaaactc
ttgaatgaagagaaacagttcagaataaatgaaggttatagagcatgtgatgggttaata
aaatccttcaacgaagggaagttgactctcatgccaggatgtgatgcagcccaaactttg
gaagctaaaattacacaacagttaaatgaaattcgtgaaatagctggaaaggtttgcatg
aaagagcttcactggaggaacggcccattaataatgtcacaatgtggttcgaaaggttcc
ccaatcaatatcagtcaaatggttgcgtgtgttggtcaacaagcagtaggagggcgtaga
gcaccagatggcttcaatgatcgtagtctaccacattttcctataaaatctaagactcca
tcagctaaaggatttgttgctaattcattctatagcggcttaacagcttcggagttcttt
ttccataccatgggagggcgagaaggccttgtggatacagctgtgaaaacggccgacacc
ggttatatgtcacgtcgactgatgaaatgcttggaggatctagttgttcattatgacatg
actgtcagaaactctaatggaactgttgttcagtttttttatggagatgatggcatggat
cctgcgcaaatggaaggagcagaaggatttcccgtggactttgagagattacgtttcaaa
attgaggctacttgcccagcagggagagatatgaaactacctcctttagagatacctgaa
attataaacaagaggttttcaacttatggtggttgctctgatgccttcaagaaaaagtta
tttgatttttttgagaatttatctaaaagaaaatgctatatttctgaacagcagcttcag
gtgtttttggatgcttgcatttctcggcttcgtttgaaagaaattgaagctggaacagct
attggagcaattggagctcagagtattggagagcctggaacgcaaatgactctgaagact
tttcactttgcaggggttgccagcatgaatgttacccttggagttcctcgtatcaaagaa
atcattaatgctagcaaaaagataagtacaccaatcattatggccaaacttgacgatgat
aattgtatggatattgcacaaacaataaaaggtcaaatcgagaagacattgttggatcag
gttgcaaagagcataaagcttgtgatgacgtcatttagagcttctatagttgttaaactc
gatatggtaaaaattaatggttcacggttgtgtataaatgcttatactgtcaaggagaga
atcgaaaagtctttggccaagcgcaaaagtgacaaactgaatatcaaagttcttgatgat
gataagttagctgtaatgcctgatgcggataagcacgatgctcactttgtgttacatcaa
actaagaacaagcttccatatgtcgttgtcaagggtattgataccattgaacgagcaatt
attgctgatgaggaagggaaaaagggaaagctaaacttgatcgttgaaggaacggggctt
agggacgtaatggggatccaaggaattgatgggcgtaagacagagagcaatcatatcatt
gaggtgcatcaaactcttggaatagaagcagccaggagctgtatcatcagagagataaaa
aaagtcatgcaaagtcattctatggatgtagacatacgccacatgatgctactcgctgat
gtgatgacatttaagggcgaggttttggctgttactagagtcgggattgcaaagatgaag
gaaagtattctgatgttggcatcttttgaaaagacagctgatcatctttttaatggttct
gtgaatgcgagagaggaaaagattgaaggagttactgaatgcatcatcatgggtgtacca
atgcagatcggcactggtatgatgaagataaggcagagaattgattctttgcctgagttc
aaatatgcatcagatccaatattcgcttga
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integrated database retrieval system
