Amaranthus tricolor (tampala): 130820072
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Entry
130820072 CDS
T09367
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00906
Carotenoid biosynthesis
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
Module
atri_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
130820072
Enzymes [BR:
atri01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
130820072
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
Thi4
Trp_halogenase
HI0933_like
GIDA
Pyr_redox_3
Pyr_redox
NAD_binding_8
FAD_binding_2
FAD_binding_3
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
130820072
NCBI-ProteinID:
XP_057541348
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Position
1:42618620..42620663
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AA seq
501 aa
AA seq
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MGTLLKIHSKFEICNPIIQGYSEKWSNLNVLKGHGKFTRKSHKKWCKNGIVRARNSTLLE
LVPETKKENLEFELPSYDISKGKMVDLAVVGGGPAGLAVAQQVSQAGLSVCSIDPSPKLI
WPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDEGLKKNLDRPYGRVNRKLLKSKMMQKC
ISNGVKFHQAKVIKVVHDESKSRVICNDGVTIEASVVLDATGFARSLVQYDKPYNPGYQV
AYGILAEVEGHPFDVDKMLFMDWRDSHLDCNKELKDRNSRIPTFLYAMPFSSNRIFLEET
SLVARPGLAMEDIQQRMEARLRHLDIKITHIEEDERCVIPMGGPLPVIPQRVVGIGGTAG
MVHPSTGYMVARTLAAAPIVANSIVQYLDRKNSNAGNELSAEVWKDLWPIERRQQREFFC
FGMDILLKLDLPGTRRFFDAFFDLEPRYWHGFLSSRLFLPELVVFGFSLFAHASNSSRLE
IMTKGTLPLINMINNLVQDRD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggtactttgcttaagattcatagcaaatttgagatttgcaaccctataattcaaggg
tattctgagaaatggtctaatttgaatgttctaaaggggcatgggaaatttacaagaaaa
tcacataaaaaatggtgcaaaaatgggattgttagagctagaaatagtacccttttggaa
cttgttccagagactaagaaggagaatcttgaatttgaattgccctcttatgacatatca
aagggaaaaatggttgatcttgctgttgtaggaggtggtcctgctggacttgctgttgca
cagcaagtttctcaggctggtctctcggtttgctcgatcgatccgtctcctaaattgata
tggcctaataactatggtgtttgggtggatgaatttgaagccatggatttactcgattgc
ctcgataccacttggtcaggtgctgtcgtttacattgatgaggggttgaagaagaatctc
gatagaccgtatggaagggttaaccgaaagttgttgaaatcgaaaatgatgcaaaagtgt
atatcaaatggggtgaaatttcatcaagcaaaagtaataaaagtcgtccatgacgaatca
aaatctcgagttatttgcaatgatggagtcacaattgaagcttcggttgtgttggatgca
acgggttttgctcgaagtttggtgcaatatgataagccatataaccctggttatcaagtt
gcttatggaattttggctgaagttgaaggacacccttttgatgtagataagatgttgttt
atggattggagagactctcatttggattgtaacaaagaattgaaagatcgaaatagtagg
attccgactttcctatatgccatgcctttctcttcaaataggatattcttggaggaaact
tctcttgttgctcggccagggttggccatggaagacatacaacaaagaatggaggctcgg
ttaaggcaccttgatattaaaataacgcacattgaggaggatgaacgttgtgtgattcct
atgggaggccctcttcctgtgattccacaacgagttgtgggaatcggtgggactgctggt
atggtgcatccgtctactgggtatatggtcgcgaggactttggcggcagctccgatagta
gccaattctatcgttcagtatctcgacaggaaaaacagtaatgctggaaatgaattgtct
gcagaagtgtggaaagacttgtggcctatagaaaggagacagcaaagggagttcttctgc
tttggcatggatattctgctgaaacttgatttgccgggaacaagaaggttttttgacgcg
ttttttgatctggaaccacgctattggcatggattcttatcatctcgactatttctacca
gagcttgttgttttcgggttttcactttttgctcatgcctccaactcttctaggctagag
ataatgacaaaaggaacacttcctttgataaatatgatcaacaatttagttcaagatagg
gattga
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