Amaranthus tricolor (tampala): 130824375
Help
Entry
130824375 CDS
T09367
Name
(RefSeq) biotin carboxylase 2, chloroplastic-like
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00061
Fatty acid biosynthesis
atri00620
Pyruvate metabolism
atri00640
Propanoate metabolism
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
atri01200
Carbon metabolism
atri01212
Fatty acid metabolism
Module
atri_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
130824375
00640 Propanoate metabolism
130824375
09103 Lipid metabolism
00061 Fatty acid biosynthesis
130824375
Enzymes [BR:
atri01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
130824375
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
130824375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_5
GARS_A
Motif
Other DBs
NCBI-GeneID:
130824375
NCBI-ProteinID:
XP_057545337
LinkDB
All DBs
Position
9:complement(25224237..25235102)
Genome browser
AA seq
534 aa
AA seq
DB search
MDAFLVCKSVTAPSNAPGLWMRQTKGIRRAPSSLLVESRVHFPGQAAQVLKINQKSRKCG
GALAATLSDKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEA
PSNQSYLVIPNVLSAAVSRGCSMLHPGYGFLSENAVFVEMCREHGINFIGPNPDSIRVMG
DKSTARDTMKKAGVPTVPGSDGLLQSTDEAIKLAHEIGFPVMIKATAGGGGRGMRLAKEP
DEFVKLLQQAKSEAAAAFGNDGVYLEKFVQNPRHIEFQVLADKYGNVVHFGERDCSIQRR
NQKLLEEAPSPALTPEIRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQ
VEHPVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVLKGHSIECRINAEDAFKGFRPGPGK
VTSYLPAGGPFVRMDSHVYPGYVVPPSYDSLLGKLIVWAPTREKAIARMKRALDDTIITG
VPTTIDYHKLILDIEDFKNGKVDTAFIPKHEQELAEPQKTPGATTGKELIGASA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttttttggtgtgcaaatctgttactgctccatctaatgcacctgggttatgg
atgaggcaaaccaagggaatcaggagagctccatctagtttgttagttgagagccgggtc
cattttccgggacaagcagctcaggtattgaagattaaccagaaatctcggaagtgtggt
ggagcgcttgctgcaactttaagtgataaaattctggtagcaaacagaggtgagatcgca
gttcgtgtgattcgaactgctcatgagatgggcattccatgtgttgcagtctactcaacc
atagacaaggatgcactccatgtaaaacttgctgatgaatcggtctgcattggtgaagct
ccaagtaatcaatcgtatttggtgatccccaatgttctgtcagctgctgtgagtcgagga
tgcagtatgctgcatcctggatatggctttctttctgaaaatgctgtttttgttgagatg
tgtagagaacatgggataaattttattggaccaaatccagacagcatccgtgttatgggt
gacaagtctaccgctagagacactatgaagaaagctggtgttccaactgttccaggaagt
gatggattgttacagagcactgatgaagcaattaagcttgctcatgagattgggttccca
gttatgattaaggcaactgcaggaggaggaggccgtggaatgcgtcttgccaaggaacca
gatgaattcgtgaagttgctgcagcaagctaagagtgaggctgctgctgcatttggaaat
gatggagtttatttggagaagtttgtacaaaatccaaggcatattgaatttcaggttctt
gctgacaaatatgggaatgttgttcactttggagaacgtgattgcagtattcagagaagg
aaccagaagctgcttgaagaagctccttctcctgcattgaccccagagataagaaaagcc
atgggtgacgctgctgtggctgcagcagcatctataggttacattggtgtaggaacagtg
gagtttcttctggatgaaagaggttctttctacttcatggagatgaacaccaggattcag
gttgagcatccagtgaccgaaatgatatcctcagttgacttgatcgaggagcaaattcga
gtggctatgggtgaaaagctccgctacaaacaagaagatatagtccttaaaggacattcg
attgagtgtcgaatcaatgcagaagatgcatttaaaggcttccggcctgggcctggaaag
gtaacaagttatttgccggctggaggaccatttgtgaggatggatagccatgtttatcct
ggttatgttgttccaccaagttatgattctctacttggcaagctgattgtttgggctcca
acccgagagaaagccattgctcgtatgaagagagctcttgatgatacaatcattacaggg
gtcccgacaactattgactaccacaaactaattcttgatattgaggacttcaaaaatggg
aaagtagatactgcattcattcctaagcatgaacaagaattggcagagccccaaaagact
cctggcgcaactacaggcaaagaactgattggcgccagtgcatag
DBGET
integrated database retrieval system
