KEGG   Amaranthus tricolor (tampala): 130825808
Entry
130825808         CDS       T09367                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
atri  Amaranthus tricolor (tampala)
Pathway
atri03020  RNA polymerase
atri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:atri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130825808
  09124 Replication and repair
   03420 Nucleotide excision repair
    130825808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atri03021]
    130825808
   03400 DNA repair and recombination proteins [BR:atri03400]
    130825808
Transcription machinery [BR:atri03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     130825808
  RNA polymerase III system
   RNA polymerase III
     130825808
  RNA polymerase I system
   RNA polymerase I
     130825808
DNA repair and recombination proteins [BR:atri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130825808
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 130825808
NCBI-ProteinID: XP_057547215
LinkDB
Position
10:4088764..4091738
AA seq 142 aa
MADDDYNDLDMGYEDEPPEPEIEEGEEEENVQPDDDLNDPIIEGEDREAEAKEKQQRKTS
KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQHKIPFTIRRYLPDGS
YEDWGVDELIVEDSWKRQVGGD
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggatgatgattacaatgatttggatatggggtatgaggatgagcctccagagcct
gaaattgaggaaggggaagaggaagagaatgtacaaccagatgatgacttgaatgatcct
atcatagaaggtgaagacagagaagcagaagcaaaggagaaacagcagaggaagacctcc
aaatacatgacaaagtatgagcgagctagaattcttggaacacgtgctcttcaaatcagt
atgaatgctccggtcatggtcgagttggaaggtgaaactgatccacttgagattgccatg
aaggagcttcgccaacacaagataccattcactatccggcgttatttgcctgatggaagt
tatgaagattggggagtggatgaattgatcgttgaagattcttggaagagacaagtagga
ggcgactaa

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