KEGG   Aegilops tauschii (wheat D): 109783686
Entry
109783686         CDS       T04345                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03020  RNA polymerase
ats03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109783686
  09124 Replication and repair
   03420 Nucleotide excision repair
    109783686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ats03021]
    109783686
   03400 DNA repair and recombination proteins [BR:ats03400]
    109783686
Transcription machinery [BR:ats03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     109783686
DNA repair and recombination proteins [BR:ats03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109783686
SSDB
Motif
Pfam: RNA_pol_Rpb4 TFIIF_alpha
Other DBs
NCBI-GeneID: 109783686
NCBI-ProteinID: XP_020197874
LinkDB
Position
Unknown
AA seq 229 aa
MANRGGKGSYPPSKSGAPNGRQMVLISDDSDSDSDSDDFFEEEAPPTHSKSNGKASSDSL
KTGGKASSFSNGEGSKGGKAFSAGKGGKGSASNAKPAMSDAELKLQLDMSPNSILLTNCE
AAEMLQKIQGHMAILSEDPKIKIPESFDKAFQYAKEGNHFTSAKLVKEILEPLKDYGVND
GEICMIANIGPETIEEVYALIPSLKATRSINEGKIAEALTALANIKASK
NT seq 690 nt   +upstreamnt  +downstreamnt
atggcgaacaggggagggaaggggtcgtaccccccgtccaagtcaggagcaccgaacgga
aggcagatggttctgatttctgatgattctgattctgattctgattctgatgattttttc
gaagaagaggctccccccacacactccaagtcaaatgggaaagcttcatctgatagccta
aaaactggtggaaaggcttcatccttttctaatggagaaggtagcaaaggagggaaggca
tttagtgctgggaagggtgggaagggctccgcatcaaatgcaaagcctgcaatgtctgat
gcagaactaaagcttcagcttgatatgtctccaaattctatattgttaacgaactgtgaa
gcagcagaaatgttgcagaaaattcagggacatatggctatcttatcagaggatccgaag
ataaaaattcccgagtcgtttgacaaggcctttcaatatgcaaaagaaggaaatcacttc
acctccgcgaagttggtgaaagaaatcctggaaccccttaaagactatggtgttaatgat
ggcgagatatgcatgattgcgaacattgggcctgagaccattgaagaggtttatgcactc
ataccgtctctcaaggccactaggtcgatcaatgaaggcaagatcgcagaggcccttacc
gccctcgctaacataaaagcctccaagtga

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