Agrobacterium fabrum: Atu3196
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Entry
Atu3196 CDS
T00070
Symbol
speF
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00330
Arginine and proline metabolism
atu00480
Glutathione metabolism
atu01100
Metabolic pathways
atu01110
Biosynthesis of secondary metabolites
atu04148
Efferocytosis
Module
atu_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Atu3196 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Atu3196 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Atu3196 (speF)
Enzymes [BR:
atu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Atu3196 (speF)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AAK90191
UniProt:
Q7CRV2
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Position
linear:complement(204249..205382)
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AA seq
377 aa
AA seq
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MTTARILDFIKTRRPEGPCLVVDLDVVRDNFNAFRHSLPNSAIYYAVKANPAPEILKLLA
SLGSNFDCASVAEIQMALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEK
VARAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQMGLESYGVSFHVGSQ
MMNLDAWDAALADAKRVFASLAKQGIHLQMVNMGGGFPTKYLRDVPAAEEYGQAIDTALR
KHFGNQIPKTIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMDE
AIRYPIRTERDQDEMQPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGTGAYTTT
YSAVAFNGFEPLKAYVI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgcacgcattctcgacttcatcaagacccgacgtcccgaaggcccttgcctc
gtggttgatctcgacgtcgtgcgcgacaatttcaacgcgttccggcattccctgccgaac
agcgcgatctattatgccgtcaaggcaaacccggctcccgaaatcctgaagctgctcgct
tcgctcggctccaacttcgattgcgcctccgtggctgaaatccagatggcgctcgatgcc
ggtgcaacgtccgaccggatttccttcggcaacaccatcaagaaggaacgcgacgtcgcc
cgtgctcacgcgctcggcatcgatctcttcgccgttgatagccatgaggaagtcgagaag
gttgcccgtgccgcccccggcgcgcgtgtgttctgccgcgtgctgacggatggcgaaggt
gctgaatggcctctgtcgcgcaagttcggctgcgtgccgcagatggctgtcgatgttctg
gtttatgcgcatcagatgggtctggaatcctacggcgtttccttccatgtcggttcgcag
atgatgaatctcgacgcatgggatgcagcacttgccgatgccaagcgcgtctttgcgtcg
cttgccaagcagggcatccacctgcagatggtcaacatgggcggtggtttcccgaccaag
tacctgcgcgacgttccggctgccgaagaatacggccaggcgattgacacggcgctgcgc
aagcactttggcaaccagatcccgaagacgatcatcgagccgggccgcggcatggtcggc
aatgccggcgtcatcaaggcggaagtcgttctcgtgtcgaagaagtccgacaacgacaac
caccgctgggtgttcctcgacatcggcaagttcggcggtctcgccgagacgatggacgag
gcaatccgttacccgatccgcaccgagcgtgatcaggacgagatgcagccctgcgttctg
gccggcccgacctgcgacagcgccgacgtgctgtatgaaaagaacatgtatccgctgccg
gtctcgctgaccatcggcgatgaagttctgatcgaaggcacgggtgcttacacgacgacc
tattcggcggttgcctttaatggcttcgagccgctgaaggcttacgtcatctag
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