Agrobacterium fabrum: Atu4069
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Entry
Atu4069 CDS
T00070
Symbol
soxA
Name
(GenBank) sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00260
Glycine, serine and threonine metabolism
atu01100
Metabolic pathways
Module
atu_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Atu4069 (soxA)
Enzymes [BR:
atu01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
Atu4069 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
Atu4069 (soxA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
DAO
FAD_binding_2
NAD_binding_8
HI0933_like
AlaDh_PNT_C
Thi4
GIDA
FAD_binding_3
Fer2_BFD
Pyr_redox
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AAK89360
UniProt:
A9CG08
LinkDB
All DBs
Position
linear:1184114..1187074
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AA seq
986 aa
AA seq
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MSGDYRIKGAGRLTPARTARFTFDGKIYPALEGDTVASALLANGVHLIGRSFKYHRPRGF
LSAGPEEPNALIDVSRDSLRKQPNVRATVQEVFDGAIIASQNRFPSLSFDLSAVNDLLSP
MFAAGFYYKTFMWPKAAWHKIYEPLIRRAAGLGKAPSEPDADHYSGRYAHCDVLVAGAGV
AGLTAALSAAKTGASVILVDENAEIGGALRFDTGAVIDGLPGYEWAQKVLAELQSMSNVR
VLTRTTAFGYYNHNFVALAERVTDHLATPARHQPRERLWQVRAKKVVLAAGAIERHMVFA
NNDRPGIMLAAAARTYLNQYGVSVGHNVGVYTAHDSAYETAFDLKKAGVKIAAIVDCREN
PDQRLLDEARALGIEVLAGHSVYNTAGRLRVSSMTVGRNGGSNKRKIAIDALVVSAGWTP
SVHLFSQSRGKLKFDAANQRFLPDIHVQNCVSIGACNGTDDLVAIIAEAAAAGGGSVAFS
GENARAWTGGMIGAAEGAGEGTGVKAFIDFQHDVCAKDIRLAVREGMHSVEHIKRFTTNG
MASDQGKMSNMHGLAIASEALGRDLPKVGLTTFRQPYTPVTFGTLINHSRGALFDPTRKT
PMHEEELAAGAVFEDVGNWKRAWFFPRAGEDMHEAINRECKTVRTSVGVFDASTLGKIEV
VGPDAAKFLNLIYTNAWDTLKPGRCRYGIMTREDGFVYDDGVVGRLAEDRFHVTTTTGGA
PRVLQHMEDYLQTEFPDLNVWLTSATEQWAVIAVQGPKAREVIAPFVEGIDLSPEAFPHM
AVAEGKFCGVPTRLFRVSFTGELGFEINVPADYGAAVWSAIRDRTEAVGGCLYGTETMHI
LRAEKGYIIVGQDTDGTVTPDDAGLAWAVSKKKTDFVGIRGLKRIDLTRTGRKQLVGLKT
KDRLTVPDEGGQIVTDPNQPKPMTMLGHVTSAYWSENLGHSIAFALVADGRARMGETLYI
PLADKTIAVEVTDMVFLDKEGTRLNG
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgactatcgtatcaagggcgccggtcgcctcaccccggccagaaccgcgcgt
ttcaccttcgacggcaagatttatccggcgctggagggcgataccgttgcgtcagcgctt
ctggccaatggcgtgcatctgatcggccgctcgttcaaatatcaccgcccgcgcggtttc
ctgtctgccggaccggaggagccgaacgcgctgattgacgtgtcgcgagacagcctacgc
aagcagcccaatgtgcgcgccacggtgcaggaggtgttcgacggcgccatcattgcctcg
cagaaccgtttcccgtcgctgtcctttgatctgagcgccgtcaacgacctcctgtcgccg
atgttcgcggccggtttttattataagaccttcatgtggccgaaggccgcctggcacaag
atttacgaaccgctgatccgccgcgctgccggtctcggcaaggcgccgagcgaaccggat
gctgatcattattccggccgttatgcccattgcgacgtgttggtcgccggtgccggcgtt
gccggcctgacggcggcgctgtcggcggcgaaaacaggcgccagcgtcattctggtggat
gagaatgccgagatcggcggtgcgctgcgcttcgataccggcgcggtgatcgacggtctg
cccggttacgagtgggcgcagaaggttctcgccgaacttcagtccatgtcgaatgtgcgg
gttctgacgcgcacgacggcctttggttattacaaccacaatttcgtggcgctggcggag
cgcgtcaccgatcatctcgccacgccggccagacaccagccgcgcgagcggctgtggcag
gtgcgcgccaaaaaggtggtgttggccgctggtgcaatcgagcgccacatggtctttgcc
aataatgaccggcccgggatcatgctggctgcggctgcccgcacctatcttaaccagtac
ggcgtgtccgttggccataatgtcggtgtctatacggctcatgattcggcctatgagaca
gccttcgacctgaaaaaggccggcgtgaagatcgccgccatcgtcgattgccgcgagaac
ccggaccagcgcctgctggacgaggcacgggcgctcggcatcgaagtgctggcaggccac
agtgtttacaacaccgccggccgcctgcgcgtgtcttccatgaccgttggccgcaatggc
ggctccaacaagcgcaagatcgccatagacgcgcttgtggtttcggcgggctggacgccg
tccgtgcatctcttctcacaatcgcgcggcaagctgaagtttgacgcggctaaccagcgt
ttcctgcctgatatccatgtgcagaactgcgtttccattggcgcctgcaacggcacggac
gatcttgtcgcgatcattgccgaagcggcagctgccggcggcggttcggtggcgttttcc
ggcgagaatgcaagggcctggaccggtggcatgatcggtgcggccgaaggggcgggtgag
ggcaccggcgtcaaggccttcatcgatttccagcacgatgtctgcgccaaggatatccgc
cttgccgtgcgcgagggcatgcattccgtcgagcatatcaagcgcttcaccaccaatggc
atggcgtccgatcagggcaagatgtcgaacatgcatggcctcgccatcgcgtcggaagcg
cttggccgggatttgcccaaggtcggtctcaccaccttccgccagccctatacgccggtt
actttcggcacgctcatcaaccattcgcgcggcgcgctgttcgacccgacccgcaagaca
ccgatgcatgaggaagaactggcagccggcgcggtgttcgaagatgtcggcaactggaaa
cgcgcctggttcttcccgcgtgcgggcgaggacatgcatgaggcgatcaaccgcgaatgc
aagacggtgcggacaagcgtcggcgtgttcgatgcctccacactcggcaagattgaggtg
gtcggtccggatgcggcgaagttcctgaacctcatctacaccaatgcctgggatacgctg
aaacccggccgctgccgttatggcatcatgacccgcgaagacggcttcgtttatgatgac
ggcgttgtcgggcgtctggccgaggaccgcttccatgtgacgacgacgacaggcggtgcg
ccgcgtgtgctccagcacatggaagattatcttcagaccgaattccccgatctcaatgtc
tggctcacctcggcgaccgaacaatgggcggtcattgccgtgcaggggccgaaggcgcgc
gaggtgatcgcgcccttcgtcgaaggtatcgatctgtcgccggaagccttcccgcatatg
gcggtggccgagggcaagttctgcggtgtgccgacgcggcttttccgcgtctctttcacc
ggcgaacttggtttcgaaatcaatgtgccggccgactatggcgcagccgtctggtccgcg
atccgtgacaggacggaagccgtcggcgggtgcctttatggcaccgagaccatgcatatt
ctgcgtgcggaaaagggctatatcatcgtcggtcaggatacggatggcacggtgacacct
gacgatgccgggctcgcctgggccgtttccaagaagaagactgatttcgtcggcattcgc
ggcctgaaacgcattgacctgacgcgcaccggccgcaagcagctcgtcggtttgaagacg
aaggacaggctgaccgtgcccgacgaaggcggccagatcgttaccgatccgaaccagccg
aagccgatgaccatgcttggccatgtcacctccgcctattggtcggaaaatctcggccac
tccatcgcttttgcgctggtggcggatggcagggcgcgcatgggcgaaacgctctatatt
ccgcttgccgataaaaccattgccgtcgaagtgaccgacatggtcttcctcgacaaggaa
ggaacccgtctcaatggctga
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