Agrobacterium fabrum: Atu5284
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Entry
Atu5284 CDS
T00070
Name
(GenBank) alpha-amylase
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00500
Starch and sucrose metabolism
atu01100
Metabolic pathways
atu01110
Biosynthesis of secondary metabolites
Module
atu_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Atu5284
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atu04147
]
Atu5284
Enzymes [BR:
atu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
Atu5284
Exosome [BR:
atu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Atu5284
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
CBM_48
DUF5696
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
AAK90660
UniProt:
A9CLF1
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All DBs
Position
At:complement(280768..282552)
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AA seq
594 aa
AA seq
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MNAANYRKWGAQRHQSGDTDFSIWAPASATVKLWLNDAEFDMHTAGDGWHDITKPALPGD
RYGFVLADRTRVADPASNRQQEGPRGPSLIVNHDFAWKNPNWKGRPWHEAVVYELHIGTF
TPEGTFAAAAEKLEYLADVGITTIELMPLATFAGSRGWGYDGVLQFSPQRDYGTPDELKA
FIDQAHGHGIMVLLDVVYNHFGPAGNTLQAYAPAFFKKHETPWGPAPDFNRAEVRSFFLQ
NAFYWLETYRFDGLRIDAADHLAGGDGEVDFLIEMAREVKRTIRNRHVHLVIEDARNAAS
PMTPMADGAILVDAQWNDDFHHVIHVATTNEEGGIYEDFASRPYENLRRSLATGFVYQGE
PRPSRNFAASGEPSGHLPPHRFVNFLHNHDQAGNRLRGERLRALIPPPLFGTLEAILLLC
PQTPLVFMGDEHGSANPFFFFSDHPDHNREQEIRNRLKQAESFQGELPPDASQMVMDPND
QHTMQLSTLKWTHAETTEGRQSRADMAALLAKRRGHIWPLLCSHFEKGISLDCEPRCLAI
DWHFKAGRLEMRANLSENMCELPAVKGEILHRNGSVGNTRYEGYAAQFAIYAGR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagcgaattatcgcaaatggggtgcgcagcgccatcaatccggcgacacggat
ttcagcatctgggcacccgcctcggcaacagtgaaactgtggctgaacgatgcggaattc
gacatgcacacggctggtgatggctggcacgacatcacaaaacccgccctccccggcgat
cgctatggcttcgtgctggccgacaggacgagggttgcagatcccgcttccaaccggcag
caggaaggcccgcgtggcccctccctgatcgtcaaccatgatttcgcctggaaaaacccg
aactggaagggccggccttggcacgaagcagtcgtctatgagctccatatcgggactttt
acacccgagggcacctttgccgccgcggcagagaaacttgaatatcttgcagacgtgggc
attaccaccatcgaacttatgccgcttgcgacctttgctggaagtcgcggctggggttac
gacggcgtcctgcaattttcaccgcagcgggattatggcactccagacgagctcaaggct
ttcattgatcaagcccatggccatggcatcatggtgctgttggatgtcgtctacaatcac
ttcggccccgcaggaaatacccttcaggcctacgcgccggcatttttcaagaagcatgag
acaccgtggggacccgcgccggacttcaaccgtgccgaagttcggtcgttctttcttcag
aatgcattctactggctcgagacctatcgctttgacggattgcggatcgatgccgcagat
catctcgctggcggcgacggagaggttgatttccttattgagatggcgcgggaggtgaag
cgcacaataagaaacaggcatgtgcatctggtcatagaggatgcgagaaacgcggcctcg
ccaatgacacccatggccgatggggcgatcttggtcgatgcgcagtggaacgacgatttt
caccacgtcatccacgtggcgaccacgaacgaagagggcggtatctacgaagatttcgcc
agtcggccctatgaaaatcttcgccgctcgctggcgaccggcttcgtctatcagggagaa
ccgcggccctctcggaattttgccgccagcggcgagccgagcgggcatctcccgccccat
cgatttgtgaactttctccataatcacgatcaggccggcaaccgtttgcgcggtgagagg
ctgcgtgccctcataccgccgccgcttttcggcacgctcgaggcgatcctcttgctttgc
ccgcagacgccgctggtcttcatgggggacgagcacggctcggccaacccgttcttcttc
ttttccgaccaccccgaccacaaccgggaacaggaaataaggaaccggcttaaacaggcg
gaaagttttcagggagaactcccgccagatgcttcccagatggtaatggacccgaatgat
cagcacaccatgcagctctctacactgaagtggacccatgcagaaacaaccgaggggaga
cagtcaagagcagacatggccgcgttgcttgcaaaacgccgcgggcacatctggcctctc
ctctgctcacacttcgagaaaggcatttcccttgattgcgagcctcggtgtcttgcaatc
gactggcatttcaaagcgggacggctggaaatgcgggcaaacctttcggaaaacatgtgc
gaactgccggcggtgaaaggagaaatccttcaccggaacggcagcgtcggtaacacgcga
tacgaaggttatgcggcgcaatttgcgatctatgcaggccgctaa
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