Acidithiobacillus thiooxidans: GCD22_00984
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Entry
GCD22_00984 CDS
T06281
Symbol
ppk
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
atx
Acidithiobacillus thiooxidans
Pathway
atx00190
Oxidative phosphorylation
atx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
GCD22_00984 (ppk)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCD22_00984 (ppk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atx03019
]
GCD22_00984 (ppk)
Enzymes [BR:
atx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
GCD22_00984 (ppk)
Messenger RNA biogenesis [BR:
atx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GCD22_00984 (ppk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QFX95416
UniProt:
A0A5P9XQH8
LinkDB
All DBs
Position
complement(904705..906810)
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AA seq
701 aa
AA seq
DB search
MTESEQSESAENPVSLDNAELYFNRDLSILAFNQRVLALADDPRVPLLERLRFLTIVSSN
LDEFFEVRMAGLLQRRKFGAGPLGPDMLGPDREIAAVAQMAHEIIQEQYLCLNQRLLPAL
AKEGIRLLRRKEWRAAQKRWISNYFQTEVMPLLTPLSLDPAHPFPKVQNKGLNFAIVLEG
HDAYGRRSPIAIVQAPRILPRIIQIPPHLAGPSDFVFLSSVIHEHVTALFPGLKILGFYQ
FRVTRNSELFVDEEEVDNLLDALVDELPMRPFGEAVRLEVANNCPREVVDYLLKHFELVD
DNLYSLAGPVNLSRLAAIIDMVPRQDLLFPPFVPGLPSVCSRPENIFARLREAPILLHHP
YQSFNPVLDFLRQAASDPQVIGIKQTLYRTTPDSPLIDALIEAAMAGKQVTAVVELKARF
DEANNIRMAERLEEVGVQVVYGVVNHKVHAKMILILRREDEGIRLYGHLGTGNYHPRNAR
IYTDLSLLTADSDITADMNDLFMHITGMGRVPQLRRLLQSPFTLFNALIEAIEAETRRGS
EGRILARVNALVEPELIRALYRASQAGVEIDLVVRGACALRPGIPGVSEHIRVRSIVGRF
LEHSRVYYFGNGRHPKLWISSADWMGRNLFRRLEVAVPIQDPDLRARVLEETLQLYLQDD
CNAWLMKADGSYEQLRRSPEDDCQSAQEILLRHYDRSSQHG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaagcgagcagtcagaatccgcagaaaatccggtctctctggataatgcagag
ctctacttcaatcgtgatctgagtattctcgcttttaaccaacgtgtactggcgctggcc
gatgatccccgcgtgcccttactggagcgcttgcgctttctgaccattgtttccagcaat
ctcgatgaattttttgaagtacgcatggccggattactgcaaaggcgcaaatttggtgcc
ggacccttggggcctgacatgctgggtccggatcgggaaattgccgccgttgcacaaatg
gcccatgaaatcattcaggaacaatatctctgcctgaaccagcgtctgctcccggctctg
gccaaagaaggcattaggctgctgcgccgtaaggaatggcgcgctgcacaaaagcgctgg
atcagcaattattttcagactgaagtcatgcccttgttgacccctctcagcctggacccg
gcacatccctttccgaaagtgcaaaacaaaggtctgaattttgccattgttctggaagga
catgatgcttatggacgacgcagtcccattgccatcgttcaggcccccaggattcttccc
cgaatcatccagatccctccccatctggcgggtcccagtgattttgtgtttctttcctcc
gtcattcacgaacacgtcaccgcactgtttcccggcctgaaaattctcggtttttatcag
ttcagggtcacccgtaacagcgaactgtttgtggatgaggaagaagtggataacctcctg
gacgcattagtggacgaattacccatgcgccctttcggggaagctgtacgcctggaagtc
gccaataattgcccccgcgaagtcgtcgattatctgctcaaacactttgaactggtggat
gacaatctctattcactggccgggccggtgaacctgtccaggctggcggccattattgac
atggtgccgcgccaggacctgctctttccccctttcgtaccgggactacccagcgtctgt
tcccggccggaaaatatttttgcgcgcctgcgtgaagcacccattttgctgcaccatcct
taccagagctttaatccggtgcttgattttctgcgtcaggcggcgagtgatccccaggtc
attggcatcaaacagaccctctaccgcacgactcccgactcccctctgattgatgctctg
attgaggcggcaatggcgggcaaacaggtcaccgccgtggttgaactcaaggcacgcttt
gatgaagccaacaacatccgcatggccgagcgtctggaagaagtgggcgtacaggtcgtg
tacggggtcgtcaaccacaaagtccatgccaaaatgattctgatattgcgccgcgaggat
gaaggtatccgcctttacggacatctcggcacaggcaactaccacccccgcaacgcccgg
atttatacagacctgagcctgttgaccgccgattcagacattaccgccgacatgaatgat
ctgttcatgcacatcaccggcatgggcagggtgcctcaattgcggcgcctgctgcaaagc
ccctttacgctgttcaacgcgctcattgaagccattgaagcagaaacccgcaggggtagc
gaaggacgtattctggcacgggtaaacgcgctggtggagccggagttgattcgtgcccta
taccgggcctctcaggcgggcgtcgaaattgatctggtagtgcgcggtgcctgcgccctg
cgccccggcatccccggcgtttccgagcatattcgggtgcgctccattgtcggtcgtttt
ctggaacacagccgggtttattattttggtaatggacgacatcccaagttgtggatttcc
agcgcggactggatggggcgcaatctgtttagacgcctggaggttgccgttccaatacag
gacccggacctgcgcgcccgggttctcgaggaaaccctgcagctttatctgcaggatgac
tgcaacgcctggctcatgaaggcggacggcagctatgaacaactgcgccgaagcccggaa
gatgactgtcaatccgcccaggagatcctgctgcggcactatgatcgcagcagtcaacat
ggctag
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