Aerococcus urinae CCUG36881: AWM73_04160
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Entry
AWM73_04160 CDS
T04528
Symbol
polC
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
aun
Aerococcus urinae CCUG36881
Pathway
aun03030
DNA replication
aun03430
Mismatch repair
aun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWM73_04160 (polC)
03430 Mismatch repair
AWM73_04160 (polC)
03440 Homologous recombination
AWM73_04160 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aun03032
]
AWM73_04160 (polC)
03400 DNA repair and recombination proteins [BR:
aun03400
]
AWM73_04160 (polC)
Enzymes [BR:
aun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWM73_04160 (polC)
DNA replication proteins [BR:
aun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWM73_04160 (polC)
DNA repair and recombination proteins [BR:
aun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWM73_04160 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
RNase_H_2
Rv2179c-like
tRNA_anti-codon
HHH_3
T2SSK
DEDDh_C
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AMB95750
LinkDB
All DBs
Position
893199..897512
Genome browser
AA seq
1437 aa
AA seq
DB search
MLSNEEMFQTLLRQMHWQSDDENIKQGSIEEVIVHQVSRCYQFNIRFPERLPFSAYQLFY
AQLTNTFQAIAKVKLKVIISQVSTASDQEVSAYWPVILECLNLSDGMAQQVLYANPPKIN
QGKMFLYVENAPIREYVETNYVQAILDCYQRHGFDKLSLKVIVDQDRANERQEQYQSRRQ
ALEKEEQEKAKLVQERSEQPPSNAKQVKSPDQIRIGRSIPSDQVQMMKSYTEEQRRAVME
GVVFDVEIRELRTGRCILVLKMSDYTSAFIVQKFSNTDADIAIFNSIKEGMWLRVRGDIQ
MDDRFARDLVVNARDLEAIEKEPRQDTMPEDQKRVELHLHTNMSALDATNSVTDFVKQAA
AWGHKAIAVTDHGNVQAFPEASQAAKDTGVKLIYGMEAYVVDDGVPIAYNPGHVELENAT
YVIFDVETTGLSAVYNTIIEIGAVKMHKGNVVGEFSEFLNPGHHLSSFTTELTGITDSMV
ANARPEPEVMQDFLDFCQGTILVAHNASFDVGFIDAAYQRNGLPTIENPVIDTLELARYL
YPHLKSFRLNTLSKHFNVSLEHHHRAIYDATSTGALAWIFVKEAKESHDMVYHDQLNRDI
GQGDAYKKGRPFHATILAKNQKGLKDLFKLVSASNVDYFHRVPRIPRSLLKEHREHLLIG
SACSEGEVFTAAMQKGKETAKKFAEFYDYLEIQPKASYEPLLRNQDIINNEALENIINDL
VDIGDELGITVVATGDAHYLNPEDKIYREILINSIKSNRSKYFPRAHFRTTKEMLDDFAF
LGEEKAFELVVTNSNAIADSIEFVEPIHDKLYTPHIDGAEESIRNDAFTKAHEIYGENLP
ELIEERLERELDSIIGNGFAVIYYIAQKLVWKSNEDGYIVGSRGSVGSSFAATMLGITEV
NPLPPHYVCLNCHYSHFYIHGEIGSGFDLEDKDCPECGQPLSKDGHDIPFETFLGFNGDK
VPDIDLNFSGEYQAQAHNYTKVLFGEDHVYKAGTISTVADKTAFGYVLGYDRDHNLNLRQ
TEKDFLAKGATGVKRTTGQHPGGIIVIPENMDVYDFTPIQYPADEQTADWRTTHFDFHSI
HDNVLKLDCLGHDDPTVIRKLQDLSGIEPTDIPMDDLEVYKLFNGTESLGVSPEQIFSKT
GTLGIPEFGTPFVRQMLEATHPSTFAELLQISGLSHGTDVWLGNAETLVSEKGMELKDVI
GCRDDIMMDLIHMGVPKSDSFQIMEKVRKGKGLSPEHQAIMKEHEVPEWYMDSCQKIKYM
FPKAHAAAYVINALRVAWFKVHHPIWYYCAYLSVRAEDFDLKAMAGGLESNKDRLKEIKA
KGNDASAKEKALQIVLELVNEMWERGLKFKMVDLDKSDAKDFVIEGEDTLIAPFRAVSGL
GVSVAQQVVKAREESPFLSKEDLKIRGKVSQSVIDHLDECNALNGLPEENQLSLFDF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgctttctaacgaagagatgtttcaaactttacttaggcaaatgcattggcagagtgat
gatgaaaatattaagcagggatctattgaagaggtgattgttcaccaagtctctcgctgc
tatcaattcaatattcgtttcccagaacgcttacctttttctgcttatcaacttttttat
gcccagttaaccaatacttttcaagccatagccaaagtaaaattgaaagttattatcagt
caagtaagtacagctagtgaccaagaagtgagtgcttattggccagtgattttggaatgc
ttgaatttgtcagatggcatggctcaacaagttttatatgctaatcctcctaaaattaac
caggggaagatgttcctttatgtagaaaatgcccccattcgagaatatgttgaaactaac
tacgttcaggcgatcctggattgctatcagcgccacggcttcgataagctaagtcttaag
gttattgttgatcaagacagggcgaatgagcggcaagagcaataccagtctagacgtcaa
gcgctagagaaggaagaacaagaaaaagccaagcttgtccaggagcgtagtgagcaaccc
ccttcaaatgctaagcaagttaaatctccagatcaaattcgaatcggtcggtctattcct
agtgaccaagttcagatgatgaaaagctatactgaagagcagcgtcgtgctgtaatggag
ggtgttgtttttgatgttgagatacgggaattaagaacggggcgctgcattcttgtctta
aaaatgtcagattatacctcggcctttattgtacaaaaattctctaatactgacgctgat
attgccatcttcaatagtatcaaggaaggtatgtggctacgtgttcgaggtgatatccaa
atggatgaccgctttgctagagacctcgttgttaatgcacgtgacctggaagccattgaa
aaggaaccacgtcaagataccatgccggaagatcaaaaacgagtagagcttcacttacac
acgaatatgagtgccctggatgctacgaattctgtgactgattttgtcaagcaagcggcc
gcatgggggcacaaagctatcgctgttactgaccatggtaatgtccaggcttttcctgaa
gctagtcaagcagctaaagacactggggtcaagctgatttatggtatggaagcctatgtc
gttgatgatggagtccccattgcctataatcccggccacgttgaattagaaaatgcgact
tatgttatttttgacgtggagacgaccggattatcggcagtttataacacgattattgaa
attggtgcggtaaaaatgcataaaggaaatgtggtcggagaattttctgagttcttaaat
ccaggccatcacttatctagttttaccaccgaattgacaggcattaccgacagtatggta
gctaatgcccgtcctgaacccgaagtcatgcaggatttcttggacttctgtcaaggaacg
attttagtcgctcataatgccagctttgatgttggctttattgatgctgcctaccaaaga
aatggcttacctaccatagaaaatcctgtgattgataccttggaattagctcgctacctt
tacccccatttgaaatccttccgtttaaacaccttgtccaagcattttaacgtttctcta
gaacaccaccaccgggcgatttacgatgcgacttcaacgggtgctttggcatggattttt
gttaaggaagctaaagaatctcatgatatggtttaccatgatcagttgaaccgtgatata
ggtcaaggagatgcctataaaaagggacgccccttccatgcgaccatcttagccaaaaat
caaaaggggcttaaggacttatttaaattagtgagtgcctctaatgttgactattttcac
cgggttccgcgtattcctcgctcgctcctaaaagaacaccgtgagcatctattgattggt
tccgcttgttcagaaggagaagtctttactgctgccatgcagaaaggaaaggaaaccgct
aagaaatttgctgagttttacgattaccttgaaattcaacccaaagcatcttatgagcct
cttttacgtaatcaagatattatcaataatgaggctttagaaaatattattaacgattta
gtggacattggagatgaacttggtattacagtggtagcgacaggagatgcgcattatctt
aaccccgaagataagatttaccgagaaattttgatcaattcgataaaatctaatcgctct
aaatattttcctagagcccatttcaggacgaccaaagaaatgctcgatgattttgccttt
ttgggtgaagagaaagcctttgaattagtcgtcactaattctaatgccatagctgattcc
attgaatttgtggaacctattcacgataagttgtatacaccccatatcgatggtgctgaa
gagtccattcgtaatgatgcttttactaaggctcatgaaatttacggtgagaatttacct
gaactgatcgaagaaagattagaaagggaattggacagtattattggtaacggttttgcg
gtgatctattacattgcgcaaaagttagtgtggaaatcgaatgaagatggctatattgtt
ggttctcggggttcggtgggctcttcctttgctgccaccatgttaggcattactgaagtt
aatccccttccaccacactatgtctgcctgaactgccattacagtcatttctatatccat
ggcgaaattgggtctggttttgacttagaagataaggattgtcccgaatgtggtcagcca
ttgtctaaggatggtcatgatattccttttgaaactttcttaggttttaatggagacaag
gttcctgatatcgaccttaacttctccggagaatatcaagctcaagcccataactatact
aaggtcctttttggggaggaccacgtttataaagcgggaaccatctctactgttgctgat
aaaaccgcttttggttatgttttaggttatgaccgagaccataatttaaacttaaggcaa
accgaaaaagattttctagccaaaggggctaccggggtaaaacggacaactggacaacac
ccgggtgggattattgtaattccagaaaacatggacgtttatgattttaccccgatccaa
taccctgccgatgagcaaacggctgattggcgaactacccactttgatttccattccatt
catgacaatgtcttgaaattagactgtttgggtcacgatgatcctacggttattcgtaaa
ttacaggatctgtcgggaattgagccgacagatatcccaatggacgatctcgaagtttat
aaactatttaatggaaccgaatcccttggggtgtctccagagcaaattttttccaaaacc
ggaaccctgggtattcctgaatttggtacgccattcgttagacagatgctagaagcgact
caccctagcacttttgccgaattactacaaatttccggtctttctcatggtactgatgtt
tggctgggaaatgcggaaactttggttagtgaaaagggcatggaattaaaggatgttatt
ggttgtcgggacgacattatgatggatttgattcatatgggagttcctaagagcgattcc
ttccaaattatggaaaaggtaagaaaggggaaagggctgtcacctgaacaccaagcgatc
atgaaagagcatgaggtaccagaatggtacatggattcctgccaaaaaattaagtatatg
tttcctaaagcccatgcggctgcttatgtgattaatgccttgcgagtagcttggttcaaa
gtgcaccatcctatttggtactattgtgcctatctcagtgtcagggctgaagattttgat
ttgaaagccatggcaggaggtttagaatcgaacaaggaccgccttaaagagataaaggct
aaagggaatgatgccagtgccaaagaaaaggccctacaaattgtgctagaattagtcaat
gaaatgtgggagcgtggtttgaaatttaagatggttgatttagataaatcagatgccaaa
gactttgttatcgaaggagaggataccttaattgctccattccgtgctgtttctggatta
ggtgtcagcgtggctcaacaagtcgttaaagccagagaagaatctcctttcttatcaaaa
gaagatctgaagattcgtggtaaggtcagccaatcagttatcgaccatttagatgaatgc
aatgcactgaatggcttaccggaagaaaatcaattgtccctatttgatttttaa
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integrated database retrieval system
