Trichormus variabilis: Ava_3214
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Entry
Ava_3214 CDS
T00277
Name
(GenBank) conserved hypothetical protein
KO
K14605
lycopene cyclase CruA [EC:
5.5.1.19
]
Organism
ava
Trichormus variabilis
Pathway
ava00906
Carotenoid biosynthesis
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Ava_3214
Enzymes [BR:
ava01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
Ava_3214
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Gene cluster
GFIT
Motif
Pfam:
FAD_oxidored
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ABA22822
CyanoBase:
Ava_3214
UniProt:
Q3M864
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All DBs
Position
complement(3996129..3998306)
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AA seq
725 aa
AA seq
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MKEILYLEVPITDTAVVRCWLQTEFDPGSWEKILTPDGCRLKISSKYTASSTKITENLPK
EFSIFLWSVQRTTYLKVFRWADQQLPGEKELLQSLTTAIRQRFPHHYPEPPAIDLSQQSI
FEALAPHYPLTVKYFQKMPNGEYDLKRAYWWEQRWREGVQNPQQPRQVVFSQKSDRGLVS
QRGLGGFPHERLANPEGGTGNWELEKPNPQYDLIYIGGALGVIHAAVMAKLGYKVLLVER
LPFGRMNREWNISRDELQSLINLGLVTNAELETVIVRDYKDGFNKFFDGNNPAKLRSPVL
HTPTVLNIALDSEKWLQMCGNKLKAAGGDIWDETEFIRADVNDTQVVVKVKDLPTQTEKQ
ISGRLLVDAMGTASPIAWQLNGGRAFDSVCPTVGAVVDGGFEPGVWDSQYGDVLYSHGDI
SRGRQLIWELFPGAGEELTIYLFHYHEVNPQNPGSLLEMYEDFFTILPEYRRCDMDKLVW
KKPTFGYIPGHFSVGSSDRTIAFDRLIAIGDAASLQSPLVFTGFGSLVRNLERLTTLLDV
ALKHDLLKFSNLNLIRAYQSNVSVTWLFSKGMMVPTGKFLAPQRINSMLNTFFGLLADEP
PEVADNFIKDRCDWLTFNRLALKAARKNPALLLWIWQLAGPKDLVRWLGNYFNFGRHALV
NALLSSWFPRFLLKIKPWLETNNPALWLRLLAINYAITTGRPRSPQQFAQFNSEAVIHNP
EGARG
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatcctttatttagaagtgccaatcacggatacggcggttgtgcgctgttgg
ctacaaacagaatttgacccaggcagttgggagaaaatactgactccagatggttgtagg
ctgaaaatatctagtaaatatacagcaagtagcacgaaaattaccgaaaatttacctaaa
gaattttctatatttttgtggtcagtccaaagaactacttacctcaaggtttttcgttgg
gcagatcagcaattacccggagaaaaggaactcttacaaagcttaacaacagccattcgc
cagcgttttcctcatcactatccagaaccaccagcgattgatttatcccaacaatcaatt
tttgaggctctagcaccccattaccccctaacggttaaatatttccaaaagatgcccaac
ggggaatatgaccttaaacgtgcttactggtgggaacagcgatggcgtgaaggagttcaa
aatcctcagcagccgcgtcaggtggtgttttcgcagaaaagcgataggggactggtgagc
cagcgcggtcttggaggtttcccccatgagcgactggcgaaccccgaagggggaactggg
aactgggaactggaaaagcccaatccccaatatgacctgatctatattggtggcgcgttg
ggtgtcatccatgcggcggtgatggcaaagttggggtataaggtgttgttggtggagcgt
ttgccctttggacggatgaaccgggaatggaatatttctcgtgatgaattgcaaagtttg
attaacttgggtttagtgacaaatgctgagttagaaactgtgattgtccgggattataag
gacgggtttaataagttttttgatggcaataacccagcaaaattgcgatcgcctgtcttg
cacacgcccacggtgttaaacatagccttagactcggaaaaatggttgcaaatgtgcggg
aataagctcaaggctgcgggtggcgatatttgggatgagacagaatttatccgtgcagat
gtcaatgatacacaagttgttgtaaaagtcaaagatttgcccacccaaacagaaaagcaa
ataagtggacgactgttagtagatgcgatgggaacagcttcccccattgcgtggcaatta
aacggtggtcgtgcatttgatagcgtctgtcccacagtgggcgcagtcgttgacggggga
tttgagccaggggtgtgggattcccaatatggagatgtgctttatagccacggtgatatt
tcccgtggtaggcagttgatttgggaattatttcccggtgcgggtgaagaactgacaatt
tatttgtttcactatcacgaagttaacccccaaaatcccggctcattgctggagatgtac
gaagacttcttcacaattttgccagagtatcgccgttgcgatatggacaaactggtgtgg
aaaaagccgacatttgggtacataccaggacatttcagtgtggggagtagcgatcgcacc
atcgcctttgatagattaattgcgatcggtgatgctgcttccctgcaatcacccctggta
tttactggttttggttccctggttcgtaacctagaacgactgacaaccctgttagatgta
gccctcaaacatgacctactaaagttcagtaacttgaacctgattcgcgcctatcaaagt
aatgtttctgtaacttggctcttttctaaagggatgatggttcccaccggcaaattttta
gcccctcagcgcatcaactcgatgctcaataccttctttggattgctggcagatgaaccc
ccagaagtagcagataacttcatcaaagatagatgtgattggttgacatttaaccgccta
gccctaaaagcagcccggaaaaatcccgccttactgttgtggatttggcaactagcaggc
cccaaagatttggtcagatggctgggaaattattttaactttggtcgccacgccttagtt
aacgccttactgagttcatggttcccacgcttccttctaaaaattaaaccttggctagaa
actaacaacccggcattatggctgcgactattagccattaactacgctatcaccacaggt
agaccgcgatcgccccagcaattcgcacaattcaactcagaagccgttattcataaccca
gaaggggcgagggggtag
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