Trichormus variabilis: Ava_4521
Help
Entry
Ava_4521 CDS
T00277
Name
(GenBank) transposase
KO
K14606
lycopene cyclase CruP [EC:
5.5.1.19
]
Organism
ava
Trichormus variabilis
Pathway
ava00906
Carotenoid biosynthesis
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Ava_4521
Enzymes [BR:
ava01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
Ava_4521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
DAO
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ABA24119
CyanoBase:
Ava_4521
UniProt:
Q3M4G7
LinkDB
All DBs
Position
5666172..5668901
Genome browser
AA seq
909 aa
AA seq
DB search
MPYGCQQILLNPDNDLHAILEFLCGEATKLSNCGTYYARQLYFKTGKIPSKFDLNNELSN
NIHFAAMYSQAAQQCLMGVAESFKSFMGLLKGIKNSTVTQKPKLPGYRDGGLSLVTYPAQ
AIKLKPQGLRFPLGSKVKAWFGIAEFYLSMPSNLDHKQIREYRILPRNGKFYLELVYKLP
TIKSDVDFGKCLGVDPGLNNWLTCVSNIGTSLIVDGLHLKSLNQWYNKRVSVLNENQPQG
FWSKQLAAITEKRNRQVRDAVNKTARIILNHCLENRIGTIVFGWNEGQRQNINLGNKTNQ
TFVQIPTARLKDRIAQLCEQYGLRFEETEESYTSKASFLDSDLLPTFGEKPEGWQPSGKR
VKRGLYACASGLKINADANGAAKIGSIRETLLELKLMSLTEEILSQLPGDVLGNLRRADD
VLKSIRENTAPTPSVVKESPATLETVNWDVIICGGTLGILIGCALAVRGLRVALLERGTL
QGREQEWNISRKELEVFVELNLLTPEELKKAIATEYNPARVQFKDGAEVWVKDVLNIGVD
PVYLLATLKQRFLDAGGQLFEHTPFSEVVIHPDGVMVNQQFTAKLLIDAMGHLSPISKQA
RQGKKPDALCLVVGSCAQGFSENSAGDLILSFTSLQNQCQYFWEAFPARDGRTTYLFTYM
DAHPQRLSLEDLFGEYLGLLPEYQGVELQQLKFQRALFGFFPSDRQSPLKTPWNRILPVG
DSSGNQSPLSFGGFGAMLRHLQRLTLGTQEALQTEQLSATALALLQPYQPSLSVTWLFQK
AMSVGVNQNIAPEQINQLLSTVFQEMAQLGTPVLKPFLQDIVQFSALTQTLAKTGLSHPV
LVAKIIPQVGLVNLLDWLVHYTNLGIYTALFALSPTLEIWIKNFPPTQQYYWHRLMDAWK
FGSGGDYNA
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatggctgccaacaaatactattaaaccctgataatgatcttcatgcaatctta
gagtttttgtgtggtgaagccacaaaactctctaattgcgggacttactatgcgcgtcaa
ctttactttaagacgggtaaaattcctagcaaatttgatttaaataatgagctatctaac
aatattcattttgcggcaatgtattctcaagcagcacaacaatgtttgatgggtgtagcg
gagtcattcaaatcattcatgggactgctaaaagggataaaaaatagtactgtaacgcaa
aaaccaaaacttccaggatatcgagatggcgggttaagtttggtcacatatccggctcaa
gctataaaactgaaaccacaaggtttacgttttccgttgggtagcaaggttaaagcatgg
tttggaatagccgaattttacttatctatgccctcgaatcttgaccataagcaaattaga
gagtatcggattctgcctagaaatggtaaattctatcttgaacttgtttacaaacttccg
accattaaatctgatgtggatttcggtaaatgtcttggtgtagatccaggactcaataac
tggttaacctgtgttagcaatattggcacatctttaattgtagatggactgcacctcaag
agcttgaatcaatggtataacaaacgagtctcagttcttaacgaaaaccagccgcaaggc
ttctggtctaagcagttagctgctatcactgaaaagcgaaatcgacaagttcgagatgca
gttaataaaactgctcgaataatattaaatcactgccttgaaaatcgtattggaacaatc
gtttttgggtggaatgaaggtcagcgtcaaaacattaatcttggcaataagactaatcaa
acatttgtacaaattcctactgctaggttgaaagatagaatcgctcaactctgcgaacag
tacggactgaggtttgaggaaactgaagaaagctacacaagtaaggcaagttttttagac
tctgatttgctacctacattcggcgaaaaacctgaagggtggcaaccatctgggaaaaga
gtaaaacgcggtctgtacgcttgtgcaagtggtttaaaaataaatgccgatgctaacggt
gcagcaaagataggatcaatacgagaaactctgctggaactcaaactcatgtccctaact
gaagaaattctctcccaactaccaggagacgttctaggaaatttacgccgtgctgatgat
gtcctcaaatctattcgagaaaacactgcaccaacaccctcagtagttaaagaaagccca
gccaccttagagactgtaaactgggatgtaattatttgtggtggtacattaggcatttta
attggttgtgccttagctgtacggggattgcgggtggcgctacttgagagaggtactttg
cagggacgggaacaagagtggaatatctcccgtaaagagttagaagtctttgtggagttg
aatctgctgacaccagaggagttaaagaaagcgatcgccactgaatataatccagccaga
gtccaatttaaagatggtgcagaagtttgggtaaaggatgtcttaaatattggcgtagat
ccagtttatttactagctaccttaaaacagagatttttagatgctggtggtcagttattt
gaacatacaccttttagtgaagtcgtcattcatccagatggggtaatggtcaatcagcaa
tttacagccaagttattgatagatgcaatgggacacctttctcccattagcaaacaagca
cgccaaggcaaaaaaccagatgcactttgtctggtggtgggtagttgcgctcaaggtttt
agtgaaaattctgccggtgatttaattttatcttttacatctttgcaaaaccaatgtcag
tatttttgggaagcctttcctgctagagatggtagaacaacatatttattcacctacatg
gatgctcatccccaacgcttgagcttagaagacttgtttggagaatacttgggtctctta
ccagaataccaaggtgtagaattacagcagttgaaatttcaaagagccttgtttgggttt
tttccgagcgatcgccaaagtccattaaaaacaccctggaaccgcatcctaccagtagga
gacagtagcggtaatcaatcacccctaagttttggcggttttggcgcaatgctacgtcac
ctgcaacgtttaacattgggtacccaggaagccttgcaaactgagcaattatcagccaca
gcactagcattactgcaaccatatcaaccaagcctcagtgttacttggttatttcaaaaa
gccatgagcgttggtgttaatcaaaatattgctccagagcaaattaaccaactactatca
acggtgtttcaagaaatggcacaactcggaacacccgtattaaagccctttttacaagat
atagtccaattttcagcactgacacaaacactagcaaagactggcctatctcatccagta
ttagttgctaaaataattccccaagtaggtttagtcaatctattagattggctagtgcat
tacaccaacttaggcatttatactgcgctgtttgcactaagtccaaccctagaaatatgg
attaagaattttccacctacgcaacaatactattggcatcgtttaatggatgcttggaaa
ttcggttctggcggtgattataacgcttaa
DBGET
integrated database retrieval system
