Acinetobacter variabilis: RYU24_28310
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Entry
RYU24_28310 CDS
T07586
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
avb
Acinetobacter variabilis
Pathway
avb00071
Fatty acid degradation
avb00280
Valine, leucine and isoleucine degradation
avb00310
Lysine degradation
avb00362
Benzoate degradation
avb00380
Tryptophan metabolism
avb00410
beta-Alanine metabolism
avb00640
Propanoate metabolism
avb00650
Butanoate metabolism
avb00907
Pinene, camphor and geraniol degradation
avb00930
Caprolactam degradation
avb01100
Metabolic pathways
avb01110
Biosynthesis of secondary metabolites
avb01120
Microbial metabolism in diverse environments
avb01200
Carbon metabolism
avb01212
Fatty acid metabolism
Module
avb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RYU24_28310 (fadB)
00650 Butanoate metabolism
RYU24_28310 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
RYU24_28310 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RYU24_28310 (fadB)
00310 Lysine degradation
RYU24_28310 (fadB)
00380 Tryptophan metabolism
RYU24_28310 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RYU24_28310 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RYU24_28310 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RYU24_28310 (fadB)
00930 Caprolactam degradation
RYU24_28310 (fadB)
Enzymes [BR:
avb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RYU24_28310 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RYU24_28310 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RYU24_28310 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
RYU24_28310 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
DAO
Motif
Other DBs
NCBI-ProteinID:
BCT90426
LinkDB
All DBs
Position
2990073..2992223
Genome browser
AA seq
716 aa
AA seq
DB search
MIHAGNAITVQMLEDGIAEFRFDLQGESVNKFNRATIEDFKAAIDAVSAADIQGLIVTSG
KSTFIVGADITEFGDNFAQGEQAIVDWALPVHEIFNSFEDLDIPKVAAINGMALGGGFEM
CLVCDYRVMSEQAQVGLPEIKLGIFPGFGGTVRLSRLIGIDNAVEWMAMATPKKPAAALK
DGAVDAVVAADKLKDAAIDLVKQAIHGRLDWQAKRQEKLDPIKLNMLEQMMAFNTAKGAV
LAKANPAQYPAPKLLLDSLQAGASLHRDEALKVEAQGFAKAAVTPQAGALIGLFLNDQVV
KKTSKKYEQGAHPVNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNQQLALGMSEANKL
LTKQVERKKMKPAQMGETLARIRPTLSYDEFKEVDIVIEAVTENPKVKGIVLKETESKVR
ENTIIASNTSTISITRLAENLERPENFVGMHFFNPVHMMPLVEVIRGEKTSAEAIATTVV
LAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLLKDGADFQQIDKVMEKFGWPMGPAYL
MDVVGIDTGVHGAEVMAEGFPDRMKPDFKGSIQVMYENNRLGQKNDVGFYKYELDRKGKK
AKVVDPTAYELVASVATAEKREFDPQEIIDRMMLAFCNETVRCLEDNIVATPAEADMAMI
MGVGFPPFRGGPCRYIDQTGVAEYVALCDKYAHLGKAYEAPQSLRDMAANNKKFYG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatccacgctggcaatgccattaccgtccaaatgcttgaggacggaattgcagaattc
cgctttgacttacaaggtgagtcggttaacaaattcaaccgtgcaacgattgaagatttc
aaggctgcgatcgacgcagtttccgctgctgacattcagggtttaatcgtgacttcaggc
aagtctacatttattgtaggtgctgacattactgagttcggcgataactttgctcaaggc
gaacaggcaattgttgactgggcactaccagttcatgaaatttttaacagcttcgaagac
ctggacattcctaaagttgccgcgattaacggtatggcactgggtggcggtttcgagatg
tgcttagtctgtgactaccgtgtgatgtcagaacaggcgcaagtcggcctgcctgaaatc
aaacttggtatcttcccgggtttcggtggtacggttcgtttaagccgtctgatcggtatc
gacaatgcagttgaatggatggccatggctactccgaagaaaccggctgctgcactgaaa
gatggtgctgttgatgcggttgtggctgcagacaaactgaaagatgctgcgattgacctg
gtgaaacaggcgatccatggccgtttagactggcaggcaaaacgccaggaaaaactggat
ccaatcaagctgaacatgcttgagcaaatgatggcgttcaatacggcgaaaggtgcggtt
cttgcaaaagcaaaccctgctcaatacccagcgccaaaactattgcttgattctcttcag
gcaggtgcaagcttacaccgcgatgaagcgttaaaagttgaagctcaaggctttgcgaaa
gctgcggtaactccacaagcaggtgcgttaatcggtctgttcctgaacgaccaggtggtg
aagaaaacttctaagaaatatgaacagggtgcacatccagtgaaccaggctgccgttcta
ggcgcagggatcatgggtggtggtattgcttaccaggcggcaagcaaaggcactccaatc
atcatgaaagacatcggtaaccagcaacttgcactgggtatgtctgaagcaaacaaactg
ctgaccaagcaggttgaacgcaagaagatgaagccggcgcaaatgggtgaaacccttgct
cgcatccgtcctactttaagctatgacgagtttaaagaagtcgacatcgtgatcgaagca
gtaactgaaaacccgaaagtgaaaggtatcgtactgaaagaaactgaatctaaagtacgt
gaaaacacgattattgcgtcgaacacatctacgatttcaattacgcgtctggctgaaaat
ctggaacgtcctgaaaacttcgtgggtatgcacttctttaacccggtacacatgatgcca
ttggtagaagtgattcgtggtgagaagacttctgctgaagcgattgcaacgactgttgtg
cttgctcagaaaatgggtaaaacaccaatcgtagtgaatgactgcccgggcttcctggta
aaccgcgtactgttcccttacttcggtgcatttgacctgttactgaaagatggtgctgac
ttccagcaaatcgacaaagtgatggaaaaattcggctggcctatgggtcctgcttacctg
atggacgtggttggtatcgatactggcgttcacggtgcagaagtgatggctgaaggcttc
ccggatcgtatgaaacctgatttcaaaggttcaatccaggtgatgtacgaaaacaaccgt
ctgggtcaaaagaatgacgttggtttctacaaatacgaacttgaccgtaaaggcaaaaaa
gccaaagtggttgatccaactgcatacgagcttgtggcatctgttgcaactgctgaaaaa
cgcgaatttgatcctcaagagatcattgaccgtatgatgctggctttctgtaacgaaact
gttcgttgcctggaagacaacattgttgcaactccggctgaagcagatatggcgatgatc
atgggtgtaggtttccctccattccgtggtggtccatgccgttatatcgaccagactggt
gtagctgagtatgttgcactttgcgacaaatacgcgcacttaggtaaggcttatgaagcg
ccgcaatcattgcgcgacatggctgctaacaacaaaaaattctacggttaa
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