KEGG   Agrobacterium vitis VAR03-1: RvVAR031_05500
Entry
RvVAR031_05500    CDS       T08810                                 
Name
(GenBank) type II secretion system protein E
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
avf  Agrobacterium vitis VAR03-1
Pathway
avf02020  Two-component system
Brite
KEGG Orthology (KO) [BR:avf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RvVAR031_05500
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:avf02044]
    RvVAR031_05500
   02035 Bacterial motility proteins [BR:avf02035]
    RvVAR031_05500
Enzymes [BR:avf01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RvVAR031_05500
Secretion system [BR:avf02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   RvVAR031_05500
Bacterial motility proteins [BR:avf02035]
 Pilus system
  Pilus assembly proteins
   RvVAR031_05500
SSDB
Motif
Pfam: T2SSE AAA_16 ABC_tran nSTAND3 AAA_23 AAA_28 Zeta_toxin AAA_22 cobW AAA_29 AAA_19 5_nucleotid_C FtsK_SpoIIIE DEAD KAP_NTPase AAA_30 GTP_EFTU AAA_2 TrwB_AAD_bind AAA_5 Viral_helicase1 dNK
Other DBs
NCBI-ProteinID: BCH52940
LinkDB
Position
1:complement(621452..622930)
AA seq 492 aa
MFGKRGNEGSVKSGSGMTPPVSALTSPGMPASVSASGRIEPGRAEPPRPAAPADPAQRRR
QNRTEDYYDTKSQVFSALIDTIDLSQLAKLDAESAREEIRDIVNDIISIKNFAMSISEQE
ELLDDICNDVLGYGPLEPLLARDDISDIMVNGAGQTFIEVGGKTIESEIRFRDNSQLLSI
CQRIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLSIDGPALTIRKFKKDKLNLDQLVK
FGAITPEGAQVLQIIGRVRCNVVISGGTGSGKTTLLNCLTRYIDADERVITCEDTAELQL
QQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIIVGEVRGSEVFDLLQAMNTGHD
GSMGTIHANTPRECLSRMESMIAMGGYSLPAKTVREIISGSVDIIIQAARLRDGTRRITQ
ITEVVGMEGDVIITQDLMRFEMEGEDLTGKIIGRHVSTGIGKPHFWERARYYNEERRLAA
ALDAMEQKTGVV
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgttcggtaaacgtggaaatgaagggtctgtaaagtccggttccggcatgacgccgccg
gtctcggcactgacatcgcccggcatgcccgcgtccgtttctgcctccggacggatcgaa
ccgggccgcgccgagccacccagaccagccgctcccgccgatcccgcgcagcgtcgtcgc
cagaaccggaccgaggattattacgataccaagagccaggttttttcggcactgatcgac
acgatcgacctgtcgcagcttgccaagctggacgcggaaagtgcgcgcgaggaaatccgc
gatatcgtcaacgatatcatttccatcaagaatttcgccatgtcgatctccgagcaggaa
gaactgctcgacgacatctgcaatgacgtgctgggctacggcccgttggaacccttgctg
gcccgcgacgatatttccgacatcatggtcaatggtgccggccagacctttatcgaagtc
ggcggcaagaccatcgaatccgaaatccggttccgcgacaattcccagcttctctccatc
tgccagcgcatcgtcagccaggttggccgccgcgtcgatgagagcagcccgatctgtgac
gcccgcctgccggatggctcacgcgtcaacgtgatcgctcctccactgtccatcgacggt
ccggcgctgacgatccgtaaattcaagaaggacaagctcaatctcgaccaactggtcaag
tttggcgccattacgccggaaggcgcgcaagtcctgcaaatcatcgggcgggtgcgctgt
aatgtggtgatttccggcggcaccggctcgggcaaaaccaccctgctcaattgcctgaca
cgctatattgacgccgacgaacgggtgataacctgcgaagataccgcagaattgcaattg
cagcagccgcatgtcgtgcgtcttgaaacccgcccaccgaatatcgagggcgaaggcgaa
atcaccatgcgcgatctcgtcaagaactgcctgcgcatgcggccggaacgaatcatcgtc
ggcgaggtgcgcggatcggaagtctttgacctgttgcaggcgatgaataccggccatgac
ggctcgatgggcaccatccacgccaacaccccacgcgaatgcctgagccgtatggaatcg
atgattgccatgggcggctattcgctgccggcaaagactgtgcgcgagattatttccggc
tcggtcgacatcatcatccaagcggcccgtctgcgcgatgggacacgccgcatcacccag
attaccgaagtcgtggggatggaaggcgatgtgatcatcacccaggatctgatgcgcttt
gaaatggaaggcgaggacctgaccggcaagatcattggccgccatgtgtccactggtatt
ggcaagccgcatttctgggaacgcgcccgctattacaacgaggagcgacgcctggcggcg
gcgctcgacgccatggaacagaaaaccggtgtagtctaa

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