Agrobacterium vitis VAR03-1: RvVAR031_05880
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Entry
RvVAR031_05880 CDS
T08810
Symbol
deoC
Name
(GenBank) deoxyribose-phosphate aldolase
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00030
Pentose phosphate pathway
avf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
RvVAR031_05880 (deoC)
Enzymes [BR:
avf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
RvVAR031_05880 (deoC)
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GFIT
Motif
Pfam:
DeoC
Motif
Other DBs
NCBI-ProteinID:
BCH52978
UniProt:
A0A6S6MSJ1
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All DBs
Position
1:659426..660199
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AA seq
257 aa
AA seq
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MDSRELRECAAVALSVLDLTNLKDDCRPEEIDELCARAVTPFGHTAAICIWPRFVAQARG
LLGHDGQVKIATVVNFPSGNLDIAAVVAETEAALADGADEIDLVIPYHAFIEGDETAVMD
MIRAVRAVIASPAILKVILETGELKSAALIRRASQIAIAEGADFIKTSTGKVAVNATLEA
ADIMLQEIRDSGRKVGFKPAGGISTVKDASLYFRHASAIMGDDWVMPSTFRFGASGLLND
ILAILSGEKSSAPASGY
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
ttggatagtcgtgaactgcgcgaatgcgctgccgtcgccctgtcggtgctggatctgacc
aatctgaaagacgattgcagaccggaagaaatcgatgaactttgcgcccgtgccgtgacg
ccattcggccatacggcggcgatctgtatttggccgcgtttcgtagcgcaggcgcgcggc
ttgcttggtcatgacggccaggtgaagatcgcaacggtggtcaatttcccctcgggcaat
cttgatattgcagcggttgtcgcggaaaccgaagcggctctggccgatggtgccgacgag
atcgatctggtcatcccctaccatgcttttatcgaaggcgatgaaacggccgtgatggac
atgattcgggctgtcagagccgtgatcgcctcgcccgcaattctcaaggttattctggaa
accggcgagttgaaaagtgccgcccttatccgccgcgcctcgcagatcgcgattgccgaa
ggtgctgatttcatcaagacgtcgacaggcaaggtcgcggtcaacgccaccctggaagca
gccgatatcatgctccaggagatccgcgacagtggccgcaaggtcggcttcaaaccggcg
ggcggcatttccacggtcaaggacgcaagcctgtatttccgccacgccagcgcgatcatg
ggggatgattgggtgatgccctccaccttccgtttcggcgcatccggcctgttgaatgat
atcctggcgatcctgtccggcgaaaaatcctcggccccagccagcggctactga
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