Agrobacterium vitis VAR03-1: RvVAR031_09670
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Entry
RvVAR031_09670 CDS
T08810
Symbol
tetA
Name
(GenBank) tetracycline efflux MFS transporter Tet(30)
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
avf
Agrobacterium vitis VAR03-1
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avf02000
]
RvVAR031_09670 (tetA)
01504 Antimicrobial resistance genes [BR:
avf01504
]
RvVAR031_09670 (tetA)
Transporters [BR:
avf02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
RvVAR031_09670 (tetA)
Antimicrobial resistance genes [BR:
avf01504
]
Gene variants
Tetracycline resistance genes
Transporters
RvVAR031_09670 (tetA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
Nuc_H_symport
ATG22
LacY_symp
Motif
Other DBs
NCBI-ProteinID:
BCH53357
LinkDB
All DBs
Position
1:1073046..1074239
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AA seq
397 aa
AA seq
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MNKALIVIFATVALDAVGFGLIFPILPALLREVTHIQNVAPYIGMLVALHAVIQFIFAPI
LGSLSDRLGRRPILLISLAGAAVNYLFLAFADNLWLLLLGRAITGLTSANMSVATAYVTD
ISQEDQRARRFGLFNAMFGLGFIFGPIIGGALGDYWLRLPFIAAAVLNGGNLLLAFFVLP
ESRTPTREKLDLAAINPLRPLKWALSLKNLLPMVILFFIFSLTGEAYATCWALWGGDTFQ
WSGLWIGLSLGAFGICQALAQTFLPGPAVKLFGERIAILIGVSSACISLAVIAFATESWM
VFAIMPVFSLSGIGVPALQSLATAQVDADKQGQFQGVLASALSLAAIIGPLAFSSFYYFI
RDYWPGGIWMSVIAVYAISVPLVLGLRLKTKTSGKAV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagctctgatcgtcatcttcgccactgtcgctctcgatgcggttgggtttggc
cttatctttcccattttgccggctttgttgcgggaggtgacgcatattcagaatgtggcg
ccctatatcggcatgttggtggcgcttcatgcggtcattcagtttatctttgcgccgatc
ctgggatcgctcagcgatcggcttggtcgtcggccgatcctgttgatttcgctggcgggg
gcggcggtcaattatctgtttctcgcctttgccgacaatctctggctactgctgctggga
cgtgccattaccgggttgaccagcgccaatatgtcggtggcgacggcctatgtgacggat
atttcgcaggaagatcagcgggcgcggcgctttggtctgtttaatgcgatgtttggcctg
ggcttcatcttcggcccgattatcggcggggcgctgggggattattggctgcggcttccc
ttcatcgccgccgccgtgctgaatggcggcaatctgctgctggcgtttttcgtcctgccg
gaatcccgcacgccgacgcgtgagaaactcgatctggcggccatcaacccgctgcggcct
ttgaaatgggcgttgtcgctgaaaaacctgctgccgatggtgatcttgtttttcatcttc
agcctgacaggtgaggcctatgcgacctgctgggcgctatggggcggcgatacgtttcag
tggagcgggctgtggatcggcctgtcactcggcgcgttcggcatctgtcaggcgctcgcc
cagacatttcttcccggcccggcggtcaagctgttcggtgagcggatcgccattctgatc
ggtgtttccagcgcctgcatttcgcttgccgtcattgcctttgcaaccgaaagctggatg
gtgtttgcaatcatgccggttttttccctcagtggtatcggcgttccggccctgcaatct
ctggcgaccgcccaggtcgatgcggataagcaaggtcaattccagggcgtgctggcctct
gcgctcagcctcgccgccattatcggtcccctggcgttttcgagtttctactattttatc
agggattattggccgggcggcatctggatgtcggtcattgccgtttatgcgatcagcgtg
cccttggttctgggcctgcgtctcaagactaaaaccagcgggaaagcggtttag
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