Agrobacterium vitis VAR03-1: RvVAR031_22250
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Entry
RvVAR031_22250 CDS
T08810
Symbol
cobB
Name
(GenBank) hydrogenobyrinate a,c-diamide synthase
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00860
Porphyrin metabolism
avf01100
Metabolic pathways
avf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RvVAR031_22250 (cobB)
Enzymes [BR:
avf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
RvVAR031_22250 (cobB)
6.3.5.11 cobyrinate a,c-diamide synthase
RvVAR031_22250 (cobB)
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Motif
Pfam:
GATase_3
CbiA
AAA_26
Motif
Other DBs
NCBI-ProteinID:
BCH54615
UniProt:
A0A6S6MQ58
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Position
1:complement(2427870..2429180)
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AA seq
436 aa
AA seq
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MSGLLIAAPASGSGKTTVTLGLLRALSEAGHKLAPGKAGPDYIDPAFHAAASGETCLNFD
PWAMRPELIAANAALHRQGGRTLVVEAMMGLYDGAADGTGSAADLALMLGLSVVLVVDCA
RTSHSVAALVKGFADFRPGLLMVGVILNRVASDRHEAMLRQALETIRMPVLGVIRTDTGL
ALPERHLGLVQAAEQTDLEGFISHAAQVVAKGCDLDAIMRAAVRSPDPVSEANIARLAPL
GRHIAVARDEAFAFCYEHMLLGWRRRGAQISFFSPLQDEAPADDADAIYLPGGYPELHAG
RIANAHRFRAGMLAAAARPVKIYGECGGYMVLGEGLTDADGAVHAMLGLLPLKTSFAARK
RHLGYRLLRPLAGDFFAHAMTGHEFHYSTVIEEGEGDRLFAAEDALGVSLGQVGLRRSNV
AGSYMHLIDRAGENRA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcttctgattgctgcgcctgcctccgggtcaggcaagaccaccgtcacgctc
ggcctgctgcgcgccttgagcgaggccggtcataagctggcaccgggcaaggccgggccg
gattatatcgatccggcctttcatgcggcggcaagcggtgagacctgcctgaattttgac
ccctgggcgatgcgaccggaactgatcgccgccaatgccgccctgcaccgtcagggtggc
cggaccctggtggtcgaggcgatgatggggctttacgacggggcggcggatggcactggc
tcggcggctgatctcgctctgatgctgggcctgtctgtggtgctggtggttgattgcgcc
cgcacttcgcattccgtcgccgccttggtaaagggctttgccgatttcaggcccggtctg
ctgatggtcggtgtcatcctcaaccgggttgccagcgaccggcatgaggcaatgctgcgc
caagccctggagacaatccgcatgccggtgctgggtgtgatccgcaccgatacgggtctt
gccctgccagagcggcatctcgggttggtgcaggcggcggaacagactgatcttgaaggc
tttatcagccatgccgcgcaggtggtggcaaaaggctgtgatctcgacgccatcatgcgc
gctgcggttcgcagccctgatccggtctcggaggccaatatcgcccggcttgcgccgctt
ggacgccatatcgccgtggcgcgggatgaggcatttgccttttgctatgaacatatgctg
ctgggctggcggcgacggggtgcgcagatcagcttcttttcgcccttgcaggatgaggct
ccagcagacgacgccgatgcgatctatctgcccggcggctatcccgagcttcatgccggg
cggatcgccaatgcccaccggttccgggcgggcatgctggcggcggcggcaaggccggtg
aaaatttacggggaatgcggtggctatatggtgctgggcgagggattgaccgatgcagat
ggagcggtccatgcgatgctggggcttttaccgctgaaaaccagctttgccgcgcgaaag
cgccatctgggctatcggcttttgcgaccactggcgggggatttctttgcccatgccatg
accggccatgagtttcattattcgaccgtgatcgaggaaggcgaaggagaccggttgttt
gccgccgaggatgccctgggcgtatcgctggggcaggtcggattgcggcgctccaacgtg
gctggctcctatatgcatctgatcgaccgtgcgggcgagaaccgggcatga
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