Agrobacterium vitis VAR03-1: RvVAR031_25700
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Entry
RvVAR031_25700 CDS
T08810
Symbol
rplY
Name
(GenBank) 50S ribosomal protein L25
KO
K02897
large subunit ribosomal protein L25
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
RvVAR031_25700 (rplY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
avf03011
]
RvVAR031_25700 (rplY)
Ribosome [BR:
avf03011
]
Ribosomal proteins
Bacteria
Large subunit
RvVAR031_25700 (rplY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L25p
Ribosomal_TL5_C
Motif
Other DBs
NCBI-ProteinID:
BCH54960
LinkDB
All DBs
Position
1:2805747..2806349
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AA seq
200 aa
AA seq
DB search
MSHASYELKAETRERVGKGSSRELRRNGLIPAVIYGDKQAPIAITLNTNEVTKRIHAGGF
MTTVATIEVNGEKIRVLPKDYQLDPVRDFTMHIDFLRVSANSQVTVAVPVRFVNEDKSAV
KTGAVLNIVRHDVELQVPANNIPEALTFDLEGLKIGDSVHISAVKLPAGVTPVITDRDFT
IATLVAPDVDVADEEEATEE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgcatcttacgagctcaaggccgaaacgcgcgaacgggttggtaaggggtcc
tcccgtgaacttcgccgcaacggtctcattcccgctgtcatctatggtgacaagcaggct
cccattgccattaccctgaacaccaatgaagtcaccaagcgtatccacgctggcggtttc
atgaccacggtggcaaccattgaagtcaacggcgaaaagatccgcgtcctgccaaaggac
taccagctggatccggtccgcgacttcaccatgcatatcgacttcctgcgcgtttcggca
aacagtcaggtcacggttgccgtgcctgtgcgtttcgtcaatgaagacaagtccgccgtc
aagaccggcgctgtcctcaacatcgtacgccacgacgtcgagttgcaggttccggccaac
aacattccggaagccctcaccttcgacctggaaggcctgaagatcggcgacagcgtgcat
atttctgccgtgaagctgcctgctggtgtgacccctgtcatcaccgaccgcgacttcacg
atcgcaaccctcgtcgctcctgacgttgacgttgccgacgaagaagaagctaccgaagaa
taa
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