Agrobacterium vitis VAR03-1: RvVAR031_35630
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Entry
RvVAR031_35630 CDS
T08810
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00362
Benzoate degradation
avf01100
Metabolic pathways
avf01120
Microbial metabolism in diverse environments
avf01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RvVAR031_35630 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
RvVAR031_35630 (pcaH)
Enzymes [BR:
avf01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
RvVAR031_35630 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
BCH55953
UniProt:
A0A1S2EG48
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All DBs
Position
2:330376..331116
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AA seq
246 aa
AA seq
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MKNSLPETGPFFARDRDMHPPAYAPWYKTSVLRSPQRALISLEGTKSEITGPVFGHGLLN
ETDNDLILNYAKPGEMAIGQRILVHGRVLDERGVGVNGALVEFWQANAGGRYRHKKETYL
AALDPNFGGVGRTITDENGYYWFKTIKPGAYPWPNGVNDWRPAHIHFSIFGHGFAQRLIT
QMYFEGDPMIWLCPIVKTIPDEEAIKRLVAPLDMNAAIPMDMRAYKFDIVLRGRRSTLFE
NRKEGN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattcgctgccggaaaccgggccattttttgcccgtgaccgggatatgcatccg
ccggcctatgccccctggtacaagaccagtgtgctgcgctcgccgcagcgggcgctgatt
tcgctggaaggcaccaagagcgaaattactggtccggtctttgggcatggcctgttgaac
gaaaccgataacgacctgatcctcaactatgcaaaaccaggcgaaatggcgattggtcag
cgcattctggtgcatggccgggtgttggatgagcgtggggtcggcgtaaacggtgccctg
gtcgaattctggcaggccaatgccggtgggcgttatcgccacaagaaggaaacctatctg
gcagcgctcgatccgaatttcggcggggtagggcgtaccatcaccgatgagaacggctat
tactggttcaagaccatcaagcccggtgcgtatccttggccgaacggcgtcaatgactgg
cgtccggcgcatattcatttttccatttttggtcatggctttgctcagcggctgatcacc
cagatgtatttcgagggcgatccgatgatctggctgtgtccgattgtcaaaaccattccg
gatgaagaggcgatcaagcgcctggtggcgccgctggatatgaatgcggccatcccgatg
gatatgcgcgcctataaattcgatatcgtcttgcgcggacgccgttccacgctgtttgaa
aatcgcaaggagggcaactga
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