Agrobacterium vitis VAR03-1: RvVAR031_pl03440
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Entry
RvVAR031_pl03440 CDS
T08810
Name
(GenBank) putative cysteine synthase
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
avf
Agrobacterium vitis VAR03-1
Pathway
avf00260
Glycine, serine and threonine metabolism
avf00270
Cysteine and methionine metabolism
avf01100
Metabolic pathways
avf01110
Biosynthesis of secondary metabolites
avf01230
Biosynthesis of amino acids
Module
avf_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
avf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RvVAR031_pl03440
00270 Cysteine and methionine metabolism
RvVAR031_pl03440
Enzymes [BR:
avf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
RvVAR031_pl03440
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
BCH57013
UniProt:
A0A1S2DU52
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All DBs
Position
pRvVAR031a:complement(386240..387307)
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AA seq
355 aa
AA seq
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MNILNRHSFDCIKAKASELIGDTPMLELAKTGTGSRLLLKLEQFNPTGSCKVRMARSMIL
AAEREGKLKPGGHIVEPTSGNTGTGLALVALERGYRFTAVVDHHASRDKLRAMKAMGADL
IFVEGNGEGPSTVQRRRMAEEIVAATGAFWPDQHYNPNNNLGYIGLAEELLRDVDADVDY
LVGAVGTGGTLCGTAKALRMLGSNVTSIGVEPTGSIIFGGPAGKYWQSGAGAPGGFTVGP
NVDHAFIDEGLTVDDVDAFSAARVIARRTGLLIGGTAGAAIHVAMKRLALVEPNSTMVVL
VCDAGEKYLDSIYDDDWLTERHLLDGAKHMGVHGLFDAYQESMRLVSAPAFSMGA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaatattctcaatcgtcactcttttgattgcatcaaggcgaaagcatcagaattgatt
ggtgatacgccaatgctcgaacttgcaaaaacgggcacgggaagccgacttttgctgaaa
ctggaacaattcaatccgacaggatcgtgcaaagtgcgcatggcgcgctcgatgatcctt
gccgccgaacgcgaaggcaagcttaagcccggcgggcatatcgtggagccaacatcgggt
aatactggcacagggctcgcgctcgtggcccttgaacgaggttatcggtttactgcggtg
gtggatcatcatgcgtcacgcgacaagctgcgcgccatgaaagcgatgggagccgatctg
atttttgttgaaggcaatggtgaaggacccagcacggtgcagcgccgacgcatggccgaa
gagattgtggccgcaaccggagccttctggcctgatcagcactataatcccaataataat
ttgggctacattgggcttgcggaagaactgctgcgggatgttgatgccgacgttgattac
cttgtgggtgccgttggcacgggtggaaccctgtgcggcacagccaaagcgcttcgtatg
cttggttcaaacgtaaccagcataggtgttgaacccacgggatcgattatttttggtggc
cccgccggaaaatactggcagtcgggagccggtgctccgggcggatttaccgttggtccg
aacgtagatcatgccttcattgatgaaggcctgacggtcgatgacgttgatgcctttagt
gctgcgcgcgtaattgcccgccgcacagggttgctgatcggtggcaccgcaggtgcggcc
attcatgttgccatgaaacgactggcgctcgttgagcccaatagcacaatggttgttctc
gtttgtgacgcgggcgaaaaataccttgatagtatttatgacgatgattggctgactgag
cgccatcttttggatggagccaagcacatgggcgtccatgggcttttcgatgcctatcaa
gagtccatgcgtttggtgagcgctccggcgttctcaatgggagcatag
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