Apaloderma vittatum (bar-tailed trogon): 104271311
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Entry
104271311 CDS
T08559
Symbol
SPATA5L1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avit03009
]
104271311 (SPATA5L1)
Enzymes [BR:
avit01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
104271311 (SPATA5L1)
Ribosome biogenesis [BR:
avit03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104271311 (SPATA5L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
AAA_16
RuvB_N
AAA_14
AAA_22
Rad17
AAA_2
TIP49
AAA_7
DUF815
AAA_33
Vps4_C
RNA_helicase
bpMoxR
AAA_18
AAA_28
nSTAND3
TsaE
AAA_3
ABC_tran
AAA_29
DUF6497
IstB_IS21
AAA_19
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
104271311
NCBI-ProteinID:
XP_009864242
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
GARLGAPIRISLPTGCCLCTAWPRHDLVDGYLQVDLTCRTAGVKVKDLQGFTLNVGQLEL
LAYGQLKKVAVKVVLKNSALKKSTPRAVLQETIRELLRNVYVSAGYVVAVAPNLENPVVC
IEILSVDPLVHEAGLITLQTSIKIKEVVTFEWYKHLSEDAATASAAGLDDVGKSLKEMVD
LPFRFPKTFKKLGLSVPNGVLLIGPPGVGKTLIVKAVAKEVGAYLFCISGPALYGSRPGE
TEENLRRVFEKGREMSYEGPTILFIDEVDSLCPKRGSSNNTPEDRVVAQLLTLLDGVGSE
GRMVTIAATNRPDAIDPALRRPGRFDREVIIGTPTLMQRRAILQLLTSSMPVSTDVELVK
LAEMTTGYVGADLTALCREAAMQAVFRSSLDSTEMVINRADFQEAFKKIQPSSFRSAVGL
TECKPVTWEQIGGLEDVKLKLKQNVEWPMKFPQAFARMGLSHPKGILLYGPSGCAKTTLV
KALATSCHCSFLSVSGADLFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSRSH
CKTGHGVSERVLSVLLNELDGIGLKVTESRGSKLQLEGQCQEQSDDERKLEFQETLNKDF
MVVAATNRRDMLDDALLRPGRLDKVIYIPPPDLKGRLSILKICTEKIPLDSDVLLQDVAV
RTDLFSGADIENLCKEAALLALQENGLEATTVKHEHFVRSLRTVKPSLNIKDLEFYEKFY
NQGLAS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
ggagccaggctcggcgctccgataaggatctccctgcccaccggctgctgcttgtgcacg
gcctggcccaggcacgatctggtggacgggtacctgcaggttgacctgacctgcagaacc
gcaggtgtaaaggtgaaggacctacagggcttcacgctgaacgtcggccagctggagctt
ctggcgtatggccagttgaaaaaggtggctgtgaaagtggtccttaagaactctgcactc
aaaaagtcgactcccagagcagtgttgcaggagacaatcagagagctgctaagaaatgtt
tatgtttcagctggttatgttgttgctgttgccccaaatctggaaaatcctgtggtgtgt
attgaaatactgtctgtagaccctttggtgcatgaagctggactgataaccctgcaaaca
agcataaaaattaaggaggtggtcacttttgagtggtacaaacatctgtcagaagacgct
gcaacagcttcagcagcaggactagacgatgtgggaaagtctttgaaagaaatggttgat
ctgcctttccgctttccaaaaacgtttaagaagctagggctctctgtccctaatggagtg
ctattaatagggcctccgggtgtaggtaaaactcttatcgtcaaggcagtagcaaaagaa
gtgggtgcgtatctgttttgcatcagtggcccagccctctatgggtccagaccaggagag
actgaagagaatttgcgaagagtctttgaaaagggcagagaaatgtcatatgaaggccca
accattctctttattgatgaagttgactctttatgcccaaaacgaggaagttcaaacaac
actcctgaagatcgtgttgttgctcagctgctgacactgctggatggtgtaggtagtgag
ggcaggatggtcactatagcagcaacaaacaggcctgatgccatagaccctgcactgaga
agacctggcagatttgacagggaggttattattgggactccaacactaatgcaaagaaga
gccatcctgcagttgcttacgtctagtatgccagtttctacagacgttgagctggttaaa
ctggcagaaatgacaactgggtatgttggagctgaccttacagcgctctgcagagaagct
gctatgcaggctgtgttccgcagctctttggattcaactgaaatggtgattaacagggca
gatttccaagaagcctttaaaaaaattcaaccatcctcttttcgaagtgccgttggacta
acagagtgtaaacctgtcacttgggagcaaattggtggtcttgaagatgtgaaattaaag
ttaaaacagaatgttgagtggcctatgaaatttcctcaagcgtttgctaggatgggcttg
tctcatccaaaggggattcttctctacggtccctcagggtgtgccaaaactactctggtg
aaggctctagccacaagttgtcactgttcctttctctctgtaagtggtgctgaccttttc
tcaccttacgttggagattcggagaagattttgtctcaggtttttcgccaagcaagagca
aacactccagcaataatattcctagatgagattgattctatcttgggatctcgatcacac
tgcaaaactggccatggtgtctcagagcgggttctttctgttcttctcaacgagttggac
ggtattgggctgaaagtcacagaaagcagagggagcaaactacagctcgagggtcagtgc
caagaacaaagcgacgatgagagaaagctagagtttcaggaaactttaaataaagatttc
atggtagttgctgcaacaaatagacgagatatgttggatgatgccttattgcgtcctggg
aggttagacaaggtgatctatattccacctccagatctgaagggaaggctttccattttg
aaaatttgcacagaaaaaattccattagatagtgatgtgttgctacaagatgtggcagtg
cgaacagacctcttctctggagccgatattgaaaatctatgcaaggaggctgctttattg
gcattgcaagagaatggacttgaagcaactaccgtaaaacacgagcattttgtaagatca
ttgaggactgtaaaaccatccttaaatataaaagacttggaattttatgaaaaattttat
aatcaaggattagcctcttga
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