Apaloderma vittatum (bar-tailed trogon): 104274839
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Entry
104274839 CDS
T08559
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04020
Calcium signaling pathway
avit04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104274839 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104274839 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
avit04040
]
104274839 (GRIN1)
Ion channels [BR:
avit04040
]
Ligand-gated channels
Glutamate (ionotropic)
104274839 (GRIN1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
104274839
NCBI-ProteinID:
XP_009868878
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
VYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSH
QANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEERESKSKKRNYENLDQLSYDN
KRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNMTGSGY
LWLVHPLTRLLPSAAAGVIGLQLINGKNESAHISDAVAVVAQAVHDLFEKENITDPPRGC
VGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIFN
GSHVLTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQADGTCREEFTING
DPVKKVFCTGPNETIPGNPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQERV
NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST
LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS
WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP
RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFI
WDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDLDK
TWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQL
AFAAVNVWRKNLQEETSEH
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
gtctatgcaatattagttagccaccctcctgctcccaacgatcacctaacaccaacaccc
gtatcatacacagctggcttctacaggatccctgtcattggtctgacaacacgcatgtct
atatattcggataagagcatccacctgtcgtttttgcgcacggtcccgccgtactctcac
caggccaatgtctggtttgagatgatgagagtcttcaactggaatcacgtcattctgatc
gtcagcgacgaccacgaaggtcgtgctgcacagaagaagctggagaccctcctggaggag
cgagagtccaagagtaaaaaaaggaactatgaaaacctcgaccaactttcctatgacaac
aagcgaggacccaaggctgagaaagtgcttcagtttgaccctggaaccaaaaacgtgacg
tcgctgctgctggaggctaaggagctggaggctcgagtcatcatcctttccgccagtgag
gatgatgcggccacggtgtacagatcagcagccatgctcaatatgacgggctccggctac
ctgtggctggtgcacccgctgacccgcctcctcccctctgccgcggcaggagtgatcggt
ttgcagctcatcaacgggaagaacgagtcagctcacatcagcgacgcggtcgcggtggtg
gcccaggccgtgcacgacttgtttgagaaggagaacatcaccgacccaccgcggggttgc
gtgggcaacaccaacatctggaagacaggacccctgttcaagagggtgttgatgtcctcc
aagtactcggagggtgtcactggccgggtggaattcaatgaggacggggacaggaagttt
gccaactacagcatcatgaacctgcagaatcggaaactggtccaagttgggattttcaat
ggcagccacgtcttgaccaatgaccggaagattatctggccagggggggaaactgagaaa
cctcaaggctatcagatgtcgaccaagttgaagatcgtgacgatccaccaagagcccttt
gtgtatgtgaagcccacacaagcagatgggacgtgcagggaggaattcaccatcaacgga
gatcctgtgaaaaaggtcttttgcactggacccaacgagaccatcccaggtaaccccact
gtggcactgtgctgctatggcttctgcatcgacctgctcatccggctggccggggtgatg
aacttcacctacgaggttcacctggtggctgatggtaaatttggtacccaagagcgggtc
aacaacagcaacaagaaggagtggaacgggatgatgggggagctgctgagcggccaggca
gacatgatcgtggcccccctcaccatcaacaacgagcgggcacagtacattgagttctcc
aagcccttcaagtaccagggcctcaccatccttgtgaagaaggaaatcccccgcagcacc
ttggactcgttcatgcagcctttccagagcacactgtggctgctggtggggctgtccgtg
cacgtggtggcggtgatgttatacctcttagaccgattcagcccgtttggtcggttcaaa
gtgaacagtgaggaggaggaggaagatgccctgaccctctcatcggccatgtggttctcc
tggggagtgctgctgaactctggcatcggagaaggtgctccccggagtttctctgcccgt
attcttggcatggtgtgggctggctttgctatgatcatcgtggcttcatacactgccaac
ctggcagccttcctggtgttagaccggcctgaggagcgaattacaggcataaacgaccct
cggctgcgcaacccctctgacaaattcatctacgccacggtgaagcagagctcagtggac
atctacttccgacggcaggtggagctgagcaccatgtaccggcacatggagaagcacaac
tacgagagcgctgccgaagccatccaggcagtgagggacaacaagctccacgccttcatc
tgggactcggcggttctggagttcgaagcctcgcagaagtgtgacctggtgacgacgggg
gagcttttcttccgctccggcttcgggatcgggatgcgcaaggacagtccatggaagcag
aacgtctccctggccatcctcaagtcccacgagaacggcttcatggaggatttggacaag
acttgggtgaggtatcaagagtgtgattcccgtagcaatgccccagcaacactcaccttt
gaaaatatggcaggtgtgtttatgctggtggctggaggtattgttgccgggatattttta
atattcatagaaatagcttacaaaaggcataaggacgcgcggaggaagcagatgcagctg
gcgtttgcggccgttaatgtgtggaggaaaaacctgcaggaggaaacgtcagagcactag
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integrated database retrieval system
