Archangium violaceum: JQX13_13025
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Entry
JQX13_13025 CDS
T07137
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
avm
Archangium violaceum
Pathway
avm00260
Glycine, serine and threonine metabolism
avm00270
Cysteine and methionine metabolism
avm00450
Selenocompound metabolism
avm01100
Metabolic pathways
avm01110
Biosynthesis of secondary metabolites
avm01230
Biosynthesis of amino acids
Module
avm_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JQX13_13025
00270 Cysteine and methionine metabolism
JQX13_13025
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JQX13_13025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avm04147
]
JQX13_13025
Enzymes [BR:
avm01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
JQX13_13025
Exosome [BR:
avm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
JQX13_13025
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Paralog
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GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
QRK10906
LinkDB
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Position
complement(3039721..3040887)
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AA seq
388 aa
AA seq
DB search
MADHIQDKHHLRTAAVHGGEPRKAIEGSISMPLFPSSTYVLGNPAEFDDIRYVRLNNTPN
QQAVSEKLALLEGTEAAVVTPSGTAAVSMALLAHLEKGEHVLAQDHLYGGSRKLLDSLRE
RYGVEVTYVPAEEPEAWARALRPTTRVFYLETLTNPLLEVAPLDEAVAFARRHGLVSMID
NTFATPVNFRPVELGFDVVVHSASKYLNGHSDVVAGVVAASAERVKRVRKLMNLLGVCLD
PHACFLLQRGLKTLPLRVPVQNENALALALAFKRHPGVREVRYPGLPEDPSHARARRWFK
GYGATVCFAPVGGVERAERMLKRLRIPREAPSLGGLETLVCRPATTTHAGIPDDVRRGLG
VADELIRVSLGVEDVEDIIQDFSRALGD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccacatccaggacaaacatcatttgcgcacggccgcggtacacggaggcgag
ccccggaaggccatcgagggctccatctccatgccgctcttccccagctccacctacgtg
ctgggcaaccccgcggagttcgacgacatccgctacgtgcggctcaacaacacgcccaac
cagcaggccgtctccgagaagctcgccctgctggagggcaccgaggccgccgtcgtcacc
ccctcgggcaccgccgccgtctccatggccctgctcgcccatctggagaagggggagcac
gtgctcgcgcaggaccacctctatgggggctcgcgcaagctgctggactcgctgcgcgag
cgctatggcgtggaggtcacctacgtccccgccgaggagccggaggcgtgggcccgggcg
ctgcggcccaccacccgcgtcttctacctggagacgctcaccaacccgctgctggaggtg
gcgccgctggacgaggcggtggccttcgcgcggcggcacggcctggtgtcgatgatcgac
aacaccttcgccaccccggtgaacttccggccggtggagctgggcttcgacgtggtcgtc
cacagcgcctcgaagtacctcaacggccactcggacgtggtcgccggagtggtggccgcg
agcgccgagcgggtgaagcgcgtgcgcaagctgatgaacctgctgggcgtgtgcctggac
ccgcacgcctgcttcctgctgcagcgcggcctgaagacgctaccgctgcgggtgccggtg
cagaacgagaacgcgctggcactggcattggccttcaagaggcatccgggcgtgcgcgag
gtgcgctacccggggctgccggaggatccgtcccacgcgcgcgcccggcgctggttcaag
ggctatggggccacggtgtgcttcgcgcccgtgggcggagtggagcgggcggagcggatg
ctgaagcggctgcggattccccgggaggcacccagcctgggaggactggagacgctggtg
tgccgcccagccaccaccacccacgcggggattccggatgacgtgcgccggggcctgggc
gtggcggacgagctcatccgcgtctcgttgggcgtggaggacgtggaggacatcatccag
gacttctcgcgggcgctgggggactga
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