Arcobacter venerupis: AVENP_2164
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Entry
AVENP_2164 CDS
T06858
Symbol
ligB
Name
(GenBank) protocatechuate 4,5-dioxygenase, beta subunit
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
avp
Arcobacter venerupis
Pathway
avp00362
Benzoate degradation
avp00627
Aminobenzoate degradation
avp01100
Metabolic pathways
avp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AVENP_2164 (ligB)
00627 Aminobenzoate degradation
AVENP_2164 (ligB)
00624 Polycyclic aromatic hydrocarbon degradation
AVENP_2164 (ligB)
Enzymes [BR:
avp01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
AVENP_2164 (ligB)
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
QKF67692
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Position
complement(2182798..2183643)
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AA seq
281 aa
AA seq
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MAKIIGGIGTSHIPTIMHVFDEKTNVGPYWEPFNEGIKPLRKWMKDNKPDVCIIVYNDHG
SNFSLKNVIPFGIGIADEYLPADEGYGRRPVPTFKGDATLSAHIAEHFNEKEFDVAFSFE
LDVDHGFSVPASIMFGEDCQEWPCKFIPLYVGVVQYPQPKGNRCYNLGKAIREAIDSFPE
DITVAIVGTGGLSHQLQGPRAGLINQDYDRKWLDGLVNDPESIKDISLTELIRETGSEGA
EAIMWLVMRGAMDKEVNEVHRFMHTPVSNTNYSLTILENKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctaagattattggaggaattggtacctcacacataccaacaattatgcacgttttt
gatgaaaaaacaaatgttggaccatattgggaaccatttaatgagggaattaaaccatta
agaaaatggatgaaagataataaacctgatgtttgtattattgtatacaatgatcatggt
tctaacttttctttaaaaaatgtaattccatttggtattggtattgctgatgagtattta
cctgctgatgaagggtatggtagaagacctgttccaacatttaaaggtgatgctacatta
tcagcacatattgcagagcattttaatgaaaaagaatttgatgttgctttttcttttgaa
ttagatgttgatcatggtttttcagttcccgcatcaattatgtttggtgaagattgtcaa
gagtggccttgtaaatttattcctttatatgtaggagttgttcaatatccacaaccaaaa
ggtaatagatgttataacttaggtaaagcaattagagaagcaattgattcatttcctgaa
gatattactgtagctatcgttggaacgggtggattatctcatcaattacaaggaccaaga
gcaggtctcattaatcaagattatgatagaaaatggttagatggtttagtaaatgatcct
gaaagtatcaaagatatttcactaacagagttaattagagaaacaggtagtgagggtgca
gaagctattatgtggttagttatgagaggtgctatggataaagaagtgaatgaagttcat
agattcatgcacactcctgtatcaaatactaattattctctaacaatattagagaataaa
aagtaa
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