Arcobacter venerupis: AVENP_2165
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Entry
AVENP_2165 CDS
T06858
Symbol
ligD
Name
(GenBank) protocatechuate 4,5-dioxygenase, alpha subunit
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
avp
Arcobacter venerupis
Pathway
avp00362
Benzoate degradation
avp00627
Aminobenzoate degradation
avp01100
Metabolic pathways
avp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AVENP_2165 (ligD)
00627 Aminobenzoate degradation
AVENP_2165 (ligD)
00624 Polycyclic aromatic hydrocarbon degradation
AVENP_2165 (ligD)
Enzymes [BR:
avp01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
AVENP_2165 (ligD)
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Motif
Pfam:
LigA
ApoL
Motif
Other DBs
NCBI-ProteinID:
QKF67693
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All DBs
Position
complement(2183636..2184055)
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AA seq
139 aa
AA seq
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MINYEDRDYKDIPGTIVFDLQTCIKGYELNKFCDTLNKEEARQAFLKDEEEYMSRFPKLT
QEMKDAIRKRDLNGLLDMGGNIYYLWKIAATLGLVMQQAGAMMNEPPITHAEFQQMMING
GRPIEGNRSIKENKERSNG
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgattaattatgaagatagagattataaagatattccaggaacaatagtttttgattta
caaacgtgtatcaaaggttatgagttaaataaattttgtgacactttaaataaagaagaa
gcaagacaagcatttttaaaagatgaagaagagtacatgagtagatttcctaaattgacg
caggagatgaaagatgctattagaaaaagagatttaaatggtttattagacatgggtgga
aatatctattatttatggaaaatagcagcaactttgggtcttgtaatgcaacaagcaggc
gcaatgatgaatgaacctcctattactcatgcagaatttcaacaaatgatgataaacggt
ggacgaccaattgagggtaatagaagtataaaagagaataaggaaagaagtaatggctaa
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