Agrobacterium vaccinii: HRR99_20290
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Entry
HRR99_20290 CDS
T08171
Name
(GenBank) TIM barrel protein
KO
K01805
xylose isomerase [EC:
5.3.1.5
]
Organism
avq
Agrobacterium vaccinii
Pathway
avq00040
Pentose and glucuronate interconversions
avq00051
Fructose and mannose metabolism
avq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HRR99_20290
00051 Fructose and mannose metabolism
HRR99_20290
Enzymes [BR:
avq01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.5 xylose isomerase
HRR99_20290
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GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UHS63872
LinkDB
All DBs
Position
linear:1129805..1130785
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AA seq
326 aa
AA seq
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MATQRYGAGIWHFATYLDRYATDGYGSPRSVIDAIDLAGQVNDLSVVDINYPFFGGDFSN
AQVKEALDRNKLGVIGITPEIYTREFVKGSFTNPDAGMRRRTHELVTEACEQVRYFNADY
VKLWPGQDGWDYPFQVDYGTLWKQSLDGVGQLASENPDLKFVIEYKPREPRVRMSFGSVA
RTLLGIEKIGLPNVGILLDFGHAIMGGESAADSAQLAIDYGRLFGMDVNDNYRSWDDDLV
AGSLHPIELFEFFHVLRKNKWEGVWQLDQFPFREDSVATANHAIDFLKAASRGLDALDVD
ALQEAQSRHDAIGALKIAQKALYGAM
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacagcgctatggtgccggaatctggcatttcgcaacctatctcgatcgttat
gcgacggatggctatggttcgcctcgcagcgtgatcgacgctatcgatcttgcggggcag
gtgaatgacctctcggtagtcgatatcaactatccattttttggcggggacttttccaac
gctcaggtgaaggaggcgcttgatcgaaacaagctcggcgttatcggtattacacccgaa
atttacacgcgcgagttcgtcaaaggctctttcacaaatcccgatgcaggcatgcggcgg
cgaacgcatgagttggtgacggaagcctgtgagcaggtgcgttatttcaatgccgattac
gtcaagctatggccgggtcaggatggctgggattatccttttcaggtggattacggcacg
ctgtggaagcaatcgctcgatggtgttggacagctcgccagcgaaaatcctgatctgaaa
ttcgtgatcgagtacaaaccccgcgaaccgcgtgtgcggatgagcttcggctctgtcgcg
cggacgttgttgggtatcgaaaagatcggcttgccgaatgtcggcattctcctggatttc
ggtcacgcgatcatgggtggagaatccgctgccgacagcgcgcaactggcgatcgactat
gggcgcctgttcggtatggacgtgaacgataattatcggtcctgggatgacgaccttgtg
gcaggcagccttcatcccatcgaactgttcgagtttttccacgtgctgaggaagaacaag
tgggaaggtgtatggcagctcgatcagtttcccttccgcgaagacagtgtcgcgacagcc
aaccacgccatcgacttcctcaaggccgcatcgagaggtctcgacgcgctggatgtggat
gcgctgcaagaggcccagtcacggcacgacgcaatcggcgcactgaaaattgctcaaaaa
gctttgtatggcgcaatgtag
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