Avibacterium volantium: NCTC3438_00625
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Entry
NCTC3438_00625 CDS
T06626
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
avt
Avibacterium volantium
Pathway
avt03030
DNA replication
avt03410
Base excision repair
avt03420
Nucleotide excision repair
avt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC3438_00625 (polA)
03410 Base excision repair
NCTC3438_00625 (polA)
03420 Nucleotide excision repair
NCTC3438_00625 (polA)
03440 Homologous recombination
NCTC3438_00625 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avt03032
]
NCTC3438_00625 (polA)
03400 DNA repair and recombination proteins [BR:
avt03400
]
NCTC3438_00625 (polA)
Enzymes [BR:
avt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC3438_00625 (polA)
DNA replication proteins [BR:
avt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC3438_00625 (polA)
DNA repair and recombination proteins [BR:
avt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC3438_00625 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC3438_00625 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
VEB22748
UniProt:
A0A3S4KWE2
LinkDB
All DBs
Position
1:complement(630753..633617)
Genome browser
AA seq
954 aa
AA seq
DB search
MAKIEENPLVLVDGSSYLYRAFHAFPPLTNSLGEPTGAMYGVLNMLKSLIAQVQPSHIAV
VFDAKGKTFRDELFEQYKSHRPPMPDDLRKQIQPLHAIIKALGIPLLSIEGVEADDVIGT
LAVQASQAGQKVLISTGDKDMAQLVDDNIMLINTMNNSLLDREGVIEKYGIPPELIIDYL
ALMGDSADNIPGVAGVGEKTALGLLQGIGSMAEIYANLEKVAELPIRGAKKLGEKLLAAK
ADADLSYILATIKTDVPLAVKPEELTLGQNQRDELVEYFARYEFKRWLNEVMDGESGLTK
GDLQSAKFATPTAQNETVTKSAVKNSVKIDRTLYETVDSQAKLDEWLNKIQHVKLIAVDT
ETDNLDVMQANLVGISFALENGEACYIPLDHLHEVARESQSQGDLFGSADATETYFERVP
SQLDKQQCLAALKPLLENPQIEKVGQNIKYDLTVFANHGIALQGVRFDTMLESYVLNSTG
RHNMDELAKRHLDHQTIEFEAIAGKGKKQLTFDKIAIEQASEYAAEDADITMKLHQTLWP
ELAQTESLVKLFDDIEMPLVGVLSRIERNGVLVDSQTLLAQSQEISEKLTSLESQVHQAA
GENFNLASTKQLQEILFEKLGLPIIAKTPKGAPSTNEEVLEELAQQGHIVPKLLIEHRGL
AKLKSTYTDKLPLMINPRTGRIHTSYHQAVTVTGRLSSSDPNLQNIPIRNEEGRRIRQAF
IAREGYKIIAADYSQIELRIMAHLSQDQGLISAFQQGKDIHRSTAAEIFGVPLDEVTSEQ
RRSAKAINFGLIYGMSAFGLSRQLGIPRGDAQKYMDLYFQRYPGVQTFMTDIREKAKQQG
YVETLFGRRLYLPEIQSSNAMRRKGAERVAINAPMQGTAADIIKRAMIAIDSAIAQDPNI
AMIMQVHDELVFEVKTDRVDHYRSQIQSLMQNAAELVVPLIVDVGVGENWDEAH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaattgaagaaaatccgcttgtgttagtggacggatcgtcttatttgtatcgt
gcgttccacgcgtttccaccgctcaccaattcccttggcgagccaacgggggcgatgtat
ggcgtgttgaatatgctgaaaagtttgattgcgcaggtgcagccgagccatattgcggtg
gtgtttgatgccaaagggaaaactttccgtgatgaattatttgagcaatataaatcgcac
cgtccgccgatgcctgatgatttgcgcaagcaaattcagcccttgcacgccattatcaaa
gcccttggtattccgcttttatccattgaaggggtggaagcggacgatgttatcggcacg
cttgcggtgcaggcttctcaggcaggccaaaaagtgttgattagcacgggcgataaggat
atggcgcagttggtggacgataacattatgcttatcaacacaatgaataacagcctgctg
gatcgcgagggcgtgattgaaaaatatggcattccgcctgagttaattattgattattta
gccttaatgggcgacagcgcggacaatatccccggtgtggctggcgtgggcgaaaaaacc
gcacttgggcttttgcaaggcattggcagtatggcagagatttatgccaatttggaaaaa
gtggcggagctgcctattcgcggcgcgaaaaaattaggcgaaaaattgcttgccgccaaa
gctgatgcagatttgtcttacattcttgcgaccatcaaaactgatgtgccgttagcggtg
aagccagaagaactcacgcttgggcaaaatcagcgtgatgaattagtggaatatttcgcg
cgctatgagtttaagcgttggctaaatgaagtgatggacggcgaaagcggtttgaccaaa
ggggatttacaaagcgccaaatttgccacgccgacagcacaaaatgaaacggtgacaaaa
agtgcggtgaaaaattcggtaaaaatcgaccgcactttgtatgaaaccgtggatagccaa
gccaagctcgatgaatggctgaataaaattcagcacgttaaactcattgcagtggatacg
gaaaccgataatttagatgtaatgcaagcgaacttggtaggcatttcttttgctttagaa
aatggcgaagcctgctatatcccccttgatcatttgcacgaagtggcgcgtgaaagccaa
tcacaaggggatttattcggcagcgcagacgcaaccgaaacctattttgaacgtgtgccg
agccagttagacaaacagcaatgtttagcggcgctcaagcctttattggaaaatccgcag
attgaaaaagtgggacaaaatatcaaatacgatctcaccgtattcgccaatcacggcatt
gcgctacaaggcgtgcgtttcgacaccatgttggaatcctatgtgctaaacagcacaggg
cgacacaatatggacgagcttgccaaacgccatttggaccatcaaaccattgaatttgaa
gccattgctggcaagggcaaaaaacagctcacttttgataaaattgctatcgaacaagcc
agtgaatatgccgcggaagatgcggacatcacaatgaaattacaccaaaccctatggcca
gaattggcgcaaacggaaagtttggtcaagttatttgatgacatcgaaatgccgttggtg
ggcgtgttatcacgcattgaacgcaacggcgtgttggtggacagccaaaccttactcgca
caatcgcaagaaattagcgaaaaattgacctcacttgaaagccaagtgcatcaggcggca
ggggaaaatttcaaccttgcgtccaccaaacaattacaagaaatcctgtttgaaaagctt
ggtttaccgattatcgccaaaaccccaaaaggcgcgccttccaccaatgaagaagtgttg
gaagagttggcgcaacaagggcatattgtgccgaaattgctcattgaacaccgtggttta
gcgaaattaaaatccacttatacggacaaacttccgctgatgatcaatccacgcacaggg
cggattcacacctcttatcatcaagcggtaacggtaacggggcggctttcttccagcgat
ccaaacttgcagaatatccctattcgtaatgaagaaggacgccgcattcgccaagccttt
attgcgcgcgaagggtataaaatcatcgcggcggattattctcaaatcgaactgcgcata
atggcgcatttatcgcaagatcaaggcttgattagtgcattccaacaaggcaaggatatt
caccgttccaccgctgcagagatttttggcgtgccacttgatgaggttaccagcgaacaa
cgtcgcagtgcaaaagccattaactttggactcatttatggaatgagcgcgtttgggctt
tctcgtcagcttggcattcctcgtggcgatgcgcaaaaatatatggatttgtatttccaa
cgctatcccggtgtgcaaacctttatgactgatattcgcgaaaaagccaaacagcaaggc
tatgtggaaaccttgttcggacgccgtttgtatctgcctgagattcaatcgagcaacgca
atgcgcagaaaaggcgcagagcgtgtggcgatcaacgccccaatgcaaggcacggcggcg
gatattattaagcgtgcgatgatcgccattgacagcgccattgcgcaagatccgaatatc
gcaatgattatgcaagtccacgatgaattggtgtttgaagtgaaaaccgaccgcgtagat
cactaccgctcgcaaattcaatctctaatgcaaaatgccgccgagcttgtagtgccgctg
attgtagatgtgggcgttggggaaaactgggacgaagcccattaa
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