Agrobacterium vitis VAT03-9: RvVAT039_31810
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Entry
RvVAT039_31810 CDS
T08809
Name
(GenBank) pyruvate dehydrogenase complex E1 component subunit beta
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00010
Glycolysis / Gluconeogenesis
avv00020
Citrate cycle (TCA cycle)
avv00620
Pyruvate metabolism
avv00785
Lipoic acid metabolism
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
avv01120
Microbial metabolism in diverse environments
avv01200
Carbon metabolism
avv01210
2-Oxocarboxylic acid metabolism
Module
avv_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RvVAT039_31810
00020 Citrate cycle (TCA cycle)
RvVAT039_31810
00620 Pyruvate metabolism
RvVAT039_31810
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RvVAT039_31810
Enzymes [BR:
avv01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
RvVAT039_31810
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GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
Biotin_lipoyl_2
PFOR_II
QRPTase_N
Motif
Other DBs
NCBI-ProteinID:
BCH65965
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All DBs
Position
1:3436275..3437660
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AA seq
461 aa
AA seq
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MPINILMPALSPTMEEGTLSKWLKAEGDSVKSGDVIAEIETDKATMEVEAVDEGVIGKLL
IEAGTQNVKVNTPIAVLLQDGESASDVSAPKAEEAAAPAVPQEEKPTETGSASAPVPAQP
ISSAASDPSIPAGTEMVSMTVREALREAMAEEMRANDDVFIIGEEVAEYQGAYKITQGLL
AEFGDRRVVDTPITEHGFAGVAVGAAMAGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMS
GGQMGAPIVFRGPNGAAARVGAQHSQDYAAWYSQIPGLKVISPYTAADAKGLLKAAIRDP
NPVVFLENEILYGHSFDVPKLDDFVLPIGKARIHKSGKDVTVVSWSIGMTYATKAVEELT
KLGIDVELIDLRTIRPMDLPTVIESVKKTGRLVVVEEGYPQSSVGDFVANRIQREAFDYL
DAPVLTVAGKDVPMPYAANLEKLALPNVGEVVQAVKSVCYK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcaatattctcatgcccgccctgtctccgacaatggaggagggcacgctgtcc
aaatggctgaaagccgaaggcgatagcgtaaaatccggcgatgtgatcgccgaaatcgaa
accgacaaggcaaccatggaagtggaagccgtggatgaaggcgtgatcggcaagctgctg
attgaagccggaacccagaatgtcaaggtcaacacgccgattgccgtgctgttgcaggat
ggcgaaagcgcgtccgacgtttcggctcccaaggctgaagaagcagcggcaccagccgtt
ccgcaggaagaaaagccgaccgagaccggttctgcttccgcgcctgttccggctcagccg
atttccagcgctgcaagcgatccgtccattccggccggaacggaaatggtatcgatgaca
gtgcgtgaagcgctgcgcgaagccatggccgaagaaatgcgcgccaatgatgatgtgttc
atcatcggcgaggaagtggcggaatatcagggtgcctacaagatcacccagggcctgctt
gccgaattcggcgaccgtcgcgtggtcgatacgccgatcaccgagcatggttttgccggt
gtggccgtgggtgccgccatggcgggcctgcgtccaatcgtcgagttcatgaccttcaat
ttcgccatgcaggcgattgaccagatcatcaactcggctgccaagacgctctacatgtct
ggcggtcagatgggcgcgcccatcgtgttccgtggcccgaacggcgctgcggcccgcgtt
ggcgcccagcacagccaggactatgccgcatggtatagccagatcccgggcctgaaggtg
atttcgccttacacggcagccgatgccaaaggcctgctgaaagccgcgatccgcgatccg
aacccggtggtcttcctcgaaaacgaaattctctacggtcacagctttgatgtgccgaag
ctggatgatttcgttctgccgattggcaaggcgcgcattcataagtctggcaaggatgtc
actgtcgtgtcctggagcattggcatgacctatgcgaccaaggctgtggaagagctgacc
aagcttggcatcgatgtcgaactgatcgacctgcgcaccatccgtccgatggatctgccg
acggtgatcgaatcggtcaagaagaccggtcgtctggtcgtggtggaagaaggctatccg
cagtcgtccgtgggcgatttcgtggccaaccgcattcagcgcgaagccttcgattacctc
gatgcgcctgttctgaccgtggctggcaaggacgtgccgatgccttacgcggccaacctt
gaaaagctcgctctgccgaatgtcggcgaagtggtccaggccgttaaatccgtctgctac
aaataa
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