Agrobacterium vitis VAT03-9: RvVAT039_43040
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Entry
RvVAT039_43040 CDS
T08809
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00362
Benzoate degradation
avv01100
Metabolic pathways
avv01120
Microbial metabolism in diverse environments
avv01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RvVAT039_43040 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
RvVAT039_43040 (pcaH)
Enzymes [BR:
avv01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
RvVAT039_43040 (pcaH)
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GFIT
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
BCH67088
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All DBs
Position
2:1041142..1041882
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AA seq
246 aa
AA seq
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MKNSLPETGPFFARDRDMHPPAYAPWYKTSVLRSPQRALISLEGTKSEITGPVFGHGLLN
ETDNDLILNYAKPGEMAIGQRILVHGRVLDERGVGVNGALVEFWQANAGGRYRHKKETYL
AALDPNFGGVGRTITDENGYYWFKTIKPGAYPWPNGVNDWRPAHIHFSIFGHGFAQRLIT
QMYFEGDPMIWLCPIVKTIPDEEAIKRLVAPLDMNAAIPMDMRAYKFDIVLRGRRSTLFE
NRKEGN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattccctgccggaaaccgggccattttttgcccgtgaccgggatatgcatccg
ccggcctatgccccttggtacaagaccagcgtgctgcgttcgccgcagcgggcgttgatt
tcgcttgagggtaccaagagcgaaattaccggcccggtcttcgggcacggcctgttgaac
gagaccgataacgatctgatcctcaactatgccaaaccaggcgaaatggcgattggccag
cgcattctggtgcatggccgggtgctggacgagcgtggtgtcggtgtaaacggcgctttg
gttgaattctggcaggccaatgccggtgggcgttatcgccacaagaaggaaacctatctg
gcggcgctcgatccgaatttcggcggggtagggcgtaccatcaccgacgagaacggttat
tactggttcaagaccatcaagccgggtgcgtatccctggccgaacggcgtcaatgattgg
cgtccggcgcatattcatttttccattttcggccatgggtttgcccagcggttgatcacc
cagatgtatttcgaaggtgatccgatgatctggctgtgtccgatcgttaaaaccattccg
gatgaagaggcgatcaaacgcctggtggctccgctggatatgaatgcggccatcccgatg
gacatgcgcgcctataaattcgatatcgttttgcgcggacgccgctcgacactgtttgaa
aatcgcaaggagggcaactga
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