Agrobacterium vitis VAT03-9: RvVAT039_43060
Help
Entry
RvVAT039_43060 CDS
T08809
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00362
Benzoate degradation
avv01100
Metabolic pathways
avv01120
Microbial metabolism in diverse environments
avv01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RvVAT039_43060 (pcaB)
Enzymes [BR:
avv01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
RvVAT039_43060 (pcaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
Motif
Other DBs
NCBI-ProteinID:
BCH67090
LinkDB
All DBs
Position
2:1042510..1043568
Genome browser
AA seq
352 aa
AA seq
DB search
MSISPFEHPFLSGLFGDEAFSALFAEQADIAAMLSFEAALAKAQGEAGVIEVGDATAIQA
GLARFTADLDALKTATARDGVVIPELVGQMRKAVGGTSAAKLHFGATSQDVIDTSLVLRL
KMAAGLLDERLAALIAGFEQLDAAFGQNALMGHTRMQAAIPITVSDRIAAWAGPLQRHRA
RLRVLLADGFALQFGGAAGTLEKLGDKGPAVRARLAELLGLQDAPQWHSQRDRIVAFADL
LSLISGSLGKFGQDVALLAEMGGEIQLTGGGGSSAMPHKQNPVGAETLVTLARFNAVQIA
GLHQSLVHEQERSGAAWALEWLLLPQMVVATGAATKTGLQLIGAIARLGKSA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttccccatttgaacaccccttcctctccggcctgtttggcgatgaggccttt
tctgccttgtttgccgagcaggcagatattgcggccatgctgtcctttgaggcggcactg
gccaaggctcaaggtgaggccggggtgatcgaagtgggggatgccacggcgatccaggcg
ggcctcgcccgcttcacagcggatctcgatgccttgaaaacggccacggcacgcgatggc
gtggtcattcccgaattggtcggccagatgcgcaaagctgtcggcgggacaagcgctgca
aagctgcatttcggtgccaccagtcaggatgtcatcgataccagcctcgtgctgcgcctg
aagatggcggcgggactcctcgacgagcgactggccgcattgatcgccggcttcgagcag
ctagatgccgcttttgggcagaatgctctgatgggccatacccgcatgcaagcggccatc
ccgattaccgtttcagaccggatcgccgcttgggctggacctttgcaacgacaccgagcc
cgtctgcgagttttgctcgccgatggttttgccttgcaatttggcggtgctgccggaaca
ttggaaaagctcggcgataaaggccctgcggtgcgcgccagactggctgaactgctagga
cttcaggatgccccccaatggcatagccagcgcgaccggatcgttgcctttgccgatctc
ctgtcattgatctcaggcagccttggcaaattcgggcaggacgtggcgcttctggcggaa
atgggtggagaaattcaattgaccggcggcggcggctcctcggccatgccgcataagcaa
aacccggtcggggctgaaacgctggtgacgcttgcccgcttcaatgccgtccagatcgct
ggcctgcatcaaagtcttgtgcatgaacaggagcggtccggcgctgcctgggccttggaa
tggttgctgctgccgcagatggttgtggcgacaggggccgccacaaaaaccggtctgcaa
ttgatcggtgccatcgcccggcttggcaaatcggcctga
DBGET
integrated database retrieval system
