Agrobacterium vitis VAT03-9: RvVAT039_pl06330
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Entry
RvVAT039_pl06330 CDS
T08809
Symbol
yodQ
Name
(GenBank) putative metallohydrolase YodQ
KO
K01438
acetylornithine deacetylase [EC:
3.5.1.16
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00220
Arginine biosynthesis
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
avv01210
2-Oxocarboxylic acid metabolism
avv01230
Biosynthesis of amino acids
Module
avv_M00028
Ornithine biosynthesis, glutamate => ornithine
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
RvVAT039_pl06330 (yodQ)
Enzymes [BR:
avv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.16 acetylornithine deacetylase
RvVAT039_pl06330 (yodQ)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
BCH67800
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All DBs
Position
pRvVAT039b:complement(76171..77391)
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AA seq
406 aa
AA seq
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MDPKSLVDRIDEKACLDFLSKMVQHKSHSETEGEKDLARWMAAELEKIGVEAELQAFDEG
RRFNTIGRLRGQGGGKSLLFNGHLDTNPVTEGWTVDPYAGLVDDKFIYGIGVSNMKAGDA
AYFCAVKTLVDAGVKLKGDVVLTFVVGELQGGVGTLAAIRSGVKADYFINSEPSDLVAVT
MHAAALSYVIELTGDTRHLSKREESVDAIAAACDIIPRINAMTFSGARSDVHRSINRGHV
GVVHGALGRDLAEWRPPQVADFVRLKGSCRYAPGQTQEGVLADLDRELRALEERFPGLKA
KLVPEQIEGRPLMPPFEVSPDSRIVKSINAAYETVRGEKQPTGAITPTRFYGTDAGHLYH
ELGMEGIVCGPGGRYNTMPDERVDIVDFLDMIRVYMLTILDICEVA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggacccgaagtccctggtggatcggatcgacgaaaaggcctgcctcgatttcctgtcg
aagatggtccagcacaagagccattcggaaaccgaaggcgagaaggatctcgcccgctgg
atggctgcagagcttgaaaagatcggcgtcgaagccgagcttcaggcgtttgacgaaggc
cgccgcttcaacacgatcggccgcctcagggggcagggcggcggtaaaagcctgctgttc
aacggccatctcgacaccaacccggtcaccgaaggctggacggtcgatccttatgccggc
ctggtcgatgacaagttcatctacggcatcggcgtttcgaacatgaaggccggcgatgcg
gcctatttctgcgccgtgaagacgctggtcgatgccggcgtcaagctgaagggcgatgtc
gttttgaccttcgtggtcggcgaactgcagggcggcgtcggtacgctggctgcgatccgc
agcggcgtgaaggccgactatttcatcaacagcgagccgagcgacctcgttgccgtcacc
atgcatgcagcagccctcagctatgtcatcgaactgaccggcgatacccgccacctctcc
aagcgcgaagagtcggtcgatgcgatcgcggcggcctgcgacatcatcccgcgcatcaac
gccatgaccttcagcggcgctcgcagcgatgtgcatcgctcgatcaaccgaggccatgtc
ggtgtcgtgcatggcgcgctcggtcgcgaccttgcggaatggcgtccgccgcaggtggcc
gatttcgtccgcctcaagggttcctgccgttatgcgccgggccagacccaggaaggcgtg
cttgccgatctcgatcgcgaattgcgcgcactcgaagaaaggttcccgggcctgaaggcg
aagctcgttcccgaacagatcgaaggccggccgctgatgccgcccttcgaagtctcgccg
gatagccgcatcgtcaagtcgatcaatgccgcttatgaaaccgtgcgcggcgaaaagcag
ccgaccggcgcgattaccccgacccgtttctacggtacggatgccggccatctctaccat
gagcttggcatggaaggcatcgtctgcggtccgggtggccgttacaacaccatgccggac
gagcgcgtcgacatcgtggatttcctcgacatgatccgcgtctacatgctgaccattctc
gatatctgcgaagtggcctga
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