Achromobacter xylosoxidans NH44784-1996: NH44784_040821
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Entry
NH44784_040821 CDS
T02785
Name
(GenBank) diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
axo
Achromobacter xylosoxidans NH44784-1996
Pathway
axo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
axo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NH44784_040821
Enzymes [BR:
axo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
NH44784_040821
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_10
Motif
Other DBs
NCBI-ProteinID:
CCH08026
LinkDB
All DBs
Position
4358009..4360006
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AA seq
665 aa
AA seq
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MTETQDEKSILYLHFGTPSPYWRLAADSDAIELSAVKGATNIAMALKPEQAQAIRALTGI
TASLRIDIVLYGDPIQLRLVGRKINPNEWAGTASAHSDTDSVARDLVEGLSFAETVVSEA
NSVIVIVDQHGRVQRFNKVSEEYTGKREQDIVGRSVFDMFMTREEAAASRRNIAEFYKRG
QSYEVERLINTVKGPRLFLFRNKFVTSGSGEKRVYLICSGTDITEERQAQERLRVLANTD
VLTNLPNRHAITTRLKTALAEGEGARGGVLFLDLDNFKRINDHYGHGFGDRLLKSVSVAI
SSCLAPGQTLARLGGDEFLVLQEHAEAWQLEATAGRIIERLREPFRQELIEVYTSCSIGI
AMYPEHGDDLDSVVRSADIAMYVAKEAGRHTYRVFQPEMDRRNADYVWLDTNLRKALAEG
HLMLYYQPKLAGRGGEVDGVEALLRWRSPERGMICPSVFIPYAEESGLISQLGVWVMREA
ARQAAAWKRDGLDLRVAINMSARQLDDKGVVSEFMRAVGDAGLAPCLLDIELTESCLIED
EVAAIELMKQFRQLGARVHLDDFGTGYSSLSQLARIPLDAIKLDASFVRGVNENPVSQAL
ARAIVAVARTLELQVIAEGVETQEETAFLDTLGVDAKQGYLYAKPMPAAELTTWLAQRRR
LHLIA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgactgagactcaggacgaaaaatcgatcctgtacctgcatttcggtacgccgagcccc
tattggaggctggcggcggacagcgacgcgatcgaactatccgcggtcaagggcgccacc
aacatcgcgatggcgctcaagcccgagcaggcgcaggccatccgcgccctgaccggcatc
accgccagcctgcgcatcgacatcgtcctgtacggcgatccgatacagctgcggctggtc
ggccgcaagatcaatcccaacgaatgggccggcacggcctcggcgcacagcgacaccgac
tcggtggcgcgcgacctggtcgaaggcctgtcgttcgccgagacggtggtgtccgaggcc
aactcggtcatcgtcatcgtcgaccagcacgggcgcgtgcagcgcttcaacaaggtcagc
gaggaatacaccggcaagcgcgagcaggacatcgtcgggcgcagcgtgttcgacatgttc
atgacgcgcgaggaggccgccgcctcgcgccgcaacatcgccgagttctacaagcgcggg
cagtcctatgaggtcgagcgcctgatcaacacggtcaagggcccgcgcctgttcctgttc
cgcaacaagttcgtcaccagcggcagcggcgaaaagcgcgtctacctgatctgctcgggc
accgacatcaccgaggaacgccaggcgcaggagcgcttgcgggtgctggccaacaccgac
gtgctgaccaacctgcccaaccgccacgccatcaccacgcgcctgaagacggcgctggcc
gaaggcgagggcgcgcgcggcggcgtgctgttcctggacctggacaacttcaagcgcatc
aacgaccactacggccacggcttcggcgaccgcctgctcaagtcggtgtcggtggccatt
tccagctgcctggcgcccggccagacgctggcgcggctgggcggcgacgaattcctggtg
ctgcaggaacacgccgaggcgtggcagctggaggccaccgccggccgcatcatcgaacgc
ctgcgcgagccgttccgccaggaattgatcgaggtctacaccagctgctccatcggcatc
gccatgtatcccgagcatggcgacgacctggacagcgtggtgcgtagcgccgatatcgcc
atgtacgtggccaaggaggccgggcgccacacctatcgggtgttccagcccgaaatggac
cgccgcaacgccgactacgtctggctcgacaccaacctgcgcaaggccctggccgaaggc
cacctgatgctgtactaccagcccaagctggccgggcgcggcggcgaggtcgacggggtc
gaggcgctgctgcgctggcgttcgcccgaacgcggcatgatctgccccagcgtcttcatt
ccctacgcggaagagtccggcctgatctcgcagctgggcgtgtgggtgatgcgcgaggcc
gcgcgccaggccgcggcatggaagcgcgacgggctggacctgcgtgtcgcgatcaacatg
tcggcgcggcagctggacgacaagggcgtggtcagtgaattcatgcgagcggtcggcgac
gccggcctggccccctgcctgctggacatcgagctgaccgagagctgcctgatcgaggac
gaagtcgcggcgatcgagctgatgaagcagttccgccagctgggcgcgcgcgtccacctg
gacgacttcggcaccggctattcgtcgctgtcgcagctggcccgcattccgctggacgcg
atcaagctggacgccagcttcgtgcgcggcgtcaatgagaacccggtgtcgcaggcgctg
gcgcgggccatcgtggcagtggcccgcacgctcgaactccaggtgatcgccgagggcgtc
gagacccaggaggaaaccgccttcctggacacgctgggggtggacgccaagcagggctac
ctgtacgccaagcccatgccggcggccgagctgaccacctggctggcgcagcggcgccgg
ctgcatctgatcgcctga
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