Azoarcus sp. DN11: CDA09_16565
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Entry
CDA09_16565 CDS
T05691
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
azd
Azoarcus sp. DN11
Brite
KEGG Orthology (KO) [BR:
azd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
azd03009
]
CDA09_16565
Enzymes [BR:
azd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CDA09_16565
Ribosome biogenesis [BR:
azd03009
]
Prokaryotic type
ribosomal protein modification factors
CDA09_16565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
AYH44973
LinkDB
All DBs
Position
complement(3596598..3597929)
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AA seq
443 aa
AA seq
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MTQHKTSGVPRVGFVSLGCPKATVDSEHILTRLRGEGYEISGSYDDADIVVVNTCGFIDA
AVEESLDAIGEALAENGKVIVTGCLGAKDDVVLAAHPQVLAVTGPHATDAVMKAVHQHLP
KPHDPFTDLVPPQGIRLTPNHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPIHDVMREAE
ALVDSGVKELLVISQDTSAYGVDTKYRTGFWNGRPLKTKLIDLAKALGELGVWVRMHYVY
PYPSVDELIPLMAEGKILPYLDVPFQHASPRILKAMRRPANAENVLERVRAWRSICPDLT
IRSTFITGFPGETDEDFELLLQFLEEARLDRVGAFAYSPVEGAEANQLADPVPDEIREER
RMRLMEFQEDISTQRLERWIDREITVLVDDLDEDSAIARSPGDAPEIDGLVIIPNGEGLV
PGEFARVRITDCDVHDLYAEPLA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacacaagacctccggcgtaccgcgagtcggtttcgtctccctcggatgcccg
aaggcgaccgtcgactccgaacacatcctcacgcgcctgcggggcgaggggtacgagatt
tccggcagttacgacgacgcggacatcgtcgtggtgaatacctgcggcttcatcgatgct
gccgtcgaggagtccctcgatgccatcggcgaagcgcttgccgagaacggcaaggtcatc
gtcaccggctgcctcggggccaaggacgacgtggtgttggccgcgcatccgcaggtcctt
gccgttaccgggccgcatgcgaccgatgcggtgatgaaggcggtgcatcagcatctgccc
aagccgcacgacccgttcaccgacctcgtgccgccgcagggcatccgcctcacgccgaat
cactacgcctacctgaagatctcggaaggctgcaaccaccgctgttccttctgcatcatc
ccgtcgatgcgcggcgacctcgtgtcccggcccatccacgacgtgatgcgcgaagccgag
gcgctggtcgattcgggggtgaaggagcttctggtgatctcgcaggataccagcgcctac
ggcgtcgataccaagtaccgcacgggattctggaacggtcggccgctcaagacgaagctg
atcgacctggcgaaggcgctcggcgaactcggcgtctgggtgcgcatgcattatgtgtat
ccgtaccccagcgtggacgagctgattccgctgatggcggaaggcaagatcctgccgtat
ctggatgtgccgttccagcatgccagcccgcgtatcctcaaggcgatgcggcgcccggca
aacgccgagaacgtgcttgaacgtgtccgtgcgtggcggagcatctgtcccgatctgacg
attcgttcgaccttcatcaccggcttccccggcgagaccgacgaggacttcgaactgctg
ctgcagttcctcgaagaagcccggctcgaccgtgtcggcgcgttcgcatactcccccgtc
gagggggctgaagccaatcagctcgcggatcccgtcccggacgagatccgcgaggagcgc
cgcatgcgtctgatggagtttcaggaggacatctcgacccagcggctggaacgctggatc
gatcgtgaaatcacggtcctcgtggacgacctcgacgaggacagcgcgattgcccgttcg
ccgggagatgctcccgagatcgacggcctcgtcatcattccgaacggcgagggcctggtg
cccggcgaattcgcccgcgtgcgcatcaccgattgcgacgtgcacgacctgtacgccgag
ccgctcgcctga
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