Bacteroidales bacterium CF: BRDCF_p1308
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Entry
BRDCF_p1308 CDS
T02861
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bacc
Bacteroidales bacterium CF
Brite
KEGG Orthology (KO) [BR:
bacc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bacc03009
]
BRDCF_p1308 (rimO)
Enzymes [BR:
bacc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BRDCF_p1308 (rimO)
Ribosome biogenesis [BR:
bacc03009
]
Prokaryotic type
ribosomal protein modification factors
BRDCF_p1308 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
AGY53935
UniProt:
U5Q9A5
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All DBs
Position
complement(1545629..1546879)
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AA seq
416 aa
AA seq
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MANDIEISPENEPLEKAAADTVIINTCGFIKDAKEESIQAILEAVEAKRLGYTSRVLVFG
CLSQRYRHELIESIPEVDGFFGAFDTQQVLEALSSSWDKKYSNQRFLTTPDHYAYLKISE
GCDRICSYCSIPLIRGKHTSVPQENLFAEAEFLAQKGVKELILVAQDTTYYGVDLYGRRN
VAELVERLSDVKGIEWIRLLYAYPAAFPEDLLDVMANNPKVCKYLDIPLQHISDKVLANM
RRSVDGEQTRRLVEKFRNRVPGITLRTTMIVGHPGEDKRAFEELMSFVSETRFERLGAFT
YSEEEGTWGALNLKDTIRKREKEERYGRLMELQSQISLEYNESRVGTQQRVLVDSETDKY
LVARSRSESPEVDGEILIDKREMAKDYQSKDIIGTFVDVEITGAEEYDLHARMKKN
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttggccaatgatattgagatctccccggaaaatgaacccttggagaaagctgcagcagat
acagttatcataaacacctgcggttttataaaggatgcaaaggaggagtccatacaggca
atacttgaggctgtagaggccaaaagattaggatatacatcccgggttcttgtatttggc
tgtctatcacaaagataccgccatgagttgattgaatctattcctgaagtcgatggattc
tttggagcatttgacactcagcaggttcttgaagcacttagctcctcatgggataaaaaa
tatagtaaccagaggtttcttacaactccggatcactatgcctatctgaaaatctccgaa
ggttgtgacaggatttgttcctattgttccatcccacttatcagaggaaaacacacatct
gtaccacaggaaaatctttttgccgaagcagaatttctggcacagaagggggtgaaggaa
ctcatacttgtcgcacaggacacaacctattacggtgttgacctctatggccgcagaaat
gtcgcagagctggttgagagactctcggatgtaaaaggaatagagtggatacgtcttctt
tatgcctaccctgctgcatttccggaggatctgctggatgtcatggcaaataatccgaag
gtatgcaagtatctggatattcctttgcaacatatttcggataaggttttggcaaatatg
agacgttccgttgacggagagcagactaggcgacttgtggaaaaattcaggaacagggtt
cccggaatcacactcaggaccactatgattgtcggtcatccgggagaggacaaacgagcg
ttcgaagagctgatgtcatttgtctctgagacaagatttgagagacttggcgcatttacc
tactctgaggaggagggtacatggggagccctgaatctcaaagacaccatccgcaagagg
gaaaaggaggagagatacggccgcctgatggaacttcagtcacagatttcgctggaatac
aacgagtcaagagttggtacccaacagagagtattggttgactctgaaacagacaaatat
ctggtagccagaagccggagtgaaagtccggaggtggatggcgagatacttatagataaa
agagagatggcaaaggattaccaatctaaagatattattggtacatttgttgatgttgag
ataacgggtgcggaagaatatgatctgcacgccaggatgaaaaaaaactaa
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