Balaenoptera acutorostrata scammoni (minke whale): 103002158
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Entry
103002158 CDS
T03086
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion molecule 1
KO
K06527
vascular cell adhesion molecule 1
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04064
NF-kappa B signaling pathway
bacu04514
Cell adhesion molecules
bacu04668
TNF signaling pathway
bacu04670
Leukocyte transendothelial migration
bacu04933
AGE-RAGE signaling pathway in diabetic complications
bacu05143
African trypanosomiasis
bacu05144
Malaria
bacu05417
Lipid and atherosclerosis
bacu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
103002158 (VCAM1)
04668 TNF signaling pathway
103002158 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103002158 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
103002158 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
103002158 (VCAM1)
05143 African trypanosomiasis
103002158 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
103002158 (VCAM1)
05418 Fluid shear stress and atherosclerosis
103002158 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103002158 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
bacu04090
]
103002158 (VCAM1)
04091 Lectins [BR:
bacu04091
]
103002158 (VCAM1)
CD molecules [BR:
bacu04090
]
Proteins
103002158 (VCAM1)
Lectins [BR:
bacu04091
]
I-type lectins (Siglecs)
103002158 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set
ig
Ig_2
V-set
Ig_4
C2-set_2
Ig_5
ICAM_N
Ig_6
ICAM1_3_5_D2
C1-set
Adhes-Ig_like
TrkA_C
Motif
Other DBs
NCBI-GeneID:
103002158
NCBI-ProteinID:
XP_007169585
UniProt:
A0A383Z346
LinkDB
All DBs
Position
Un
AA seq
739 aa
AA seq
DB search
MPRKMVVIFGASNILWMVFAVSQAFKIDIFPESKIIAQIGDSISLTCSTTGCESPSFSWR
TQIDSPLNGKVRNEGTESTLTMDPVSLGNEHYYLCTVICESQKLEKGIPVEIYSFPKDPE
IHLSGPLEVGKPVTVTCLVPDVYPFERLEIELLKGNRSVKTQNFLEVSEMKSQETKSLEV
TFTPIDEDIGKALVCQATLHINEIDSQPQVRETTKKLQVYISPKDTIISVNPSTSLQEGD
SVTMTCTSEGLPAPQIFWSKKLDNGNLQLLSENATLTLIAMRMEDSGIYVCEGVNLVGKD
RKEVKLIVQEKMFTVEISPGSQIAAQIGDSVVLTCDVMGCESPSFSWRTQIDSPLNGKVR
SEGSKSTLTLSPVRFENEHFYLCTVTCGHKKLEKGIHVELYSFLRDPEIEMSGLLVSGNP
VTVSCKVPDVYPFDRLEIELLKGESIMKSKIFLEDVSKKSLETKSLEMTFIPTTEDTGKV
LVCLAKLPIDEMEFEPKQRQSTQMLYVNVAPGDTTILVSPSSILEEGRSVNMTCSSDGLP
APKILWSRLLSNGDLQPLSENTTLTLTSTKMEDSGIYVCEGINQVGISRKEVELIIQVAP
KDIRLTAFPSESVKEGDTVIISCTCGNVPQTLIILKKKAESGYIVLKSTDGAYTIHRAQL
EDAGVYECESKNEVGLQLRSLTLDVKGRESNKHYFSPELLVLYCASSLIIPAIGMIIYFA
RKANMKGSYSLVEAQKSKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggaagatggttgtgatctttggagcctcaaatatactttggatggtgtttgca
gtttctcaagcttttaaaatcgacatcttccctgaatccaaaattattgctcagattggt
gactccatctcactgacttgcagcacaacaggctgcgagtccccatcgttctcctggaga
actcagatagacagtccgctgaacgggaaggtgagaaatgaggggaccgaatccacgctg
accatggatcctgttagtctggggaatgaacactattacctgtgcacagtgatttgtgag
tctcagaaactggaaaaaggaatcccagtggagatctactctttccctaaggacccagag
attcatttgagtggccccctggaggttgggaagccagtcacagtcacgtgtttggtccct
gatgtttacccatttgaaaggctggagatagaattactgaagggcaaccgttccgtgaag
acacagaactttctggaggtttcagaaatgaagtcccaggaaacgaagagtttggaagta
accttcactcctattgatgaggatattgggaaagctcttgtttgtcaagctacattacac
attaatgaaattgattctcaaccccaagtaagggagactacaaaaaaactgcaagtctac
atctcacccaaggacacaattatatctgtgaatccctccacaagcctgcaagaaggtgac
tccgtgacgatgacatgtaccagtgaaggtctaccagctccacagattttctggagcaag
aaattagacaatgggaatctacagctcctttctgagaatgcaactctcactttaattgct
atgaggatggaagattctggaatttatgtgtgtgaaggagttaacctggttgggaaagac
agaaaagaggtgaaattaattgttcaagagaaaatgtttactgtagagatctctcctgga
tcccagattgctgctcagattggcgactcagttgtgttgacctgtgatgtcatgggttgc
gagtccccatctttctcttggagaacgcagatagacagccctctgaacgggaaggtgagg
agcgaggggtccaagtccacgttgaccctgagccctgtgagatttgagaatgaacatttt
tatctgtgcaccgtgacatgtgggcataagaaactggaaaaaggaatccatgtggagctc
tactccttccttagagatccagaaattgagatgagtggtctgttagtgagtggaaaccca
gtcactgtaagctgtaaggttcctgatgtgtatccttttgaccggctagagattgaatta
cttaaaggggagagtattatgaaaagtaaaatatttttggaagatgtaagtaagaaatcc
ctagagaccaagagtttggaaatgaccttcattcccaccactgaagatactggaaaagtt
cttgtttgtctggctaagttacctattgatgaaatggaatttgaacccaaacaaaggcag
agtacacagatgctatatgttaatgttgctcccggggatacaaccatcttggtcagcccc
tcctccatcctggaggaaggtagatctgtgaatatgacatgctctagcgatggccttcca
gctccgaaaatcctgtggagcaggctgctaagtaatggggatctacagcctctttctgag
aacaccactcttaccttaacgtctacaaaaatggaagattctggtatttatgtctgtgaa
ggcattaaccaggttggaataagcagaaaagaagtcgaattaattatccaagttgctcca
aaagatatacgacttacagcttttccttctgagagtgtcaaggaaggagacactgtcatt
atctcctgtacatgtggaaatgttccccaaactttgataatcctgaagaaaaaagcagag
tcaggctacatagtgctgaagtctacagatggtgcatataccatccacagggcccagctg
gaggatgcaggagtatacgaatgtgaatctaaaaatgaagttggcttgcaattaagaagc
ctaacacttgatgttaaaggaagagaaagtaacaagcactatttttctcctgaacttctc
gtgctctattgtgcatcctccttaataatacctgccattggaatgattatttactttgct
agaaaagccaacatgaaagggtcatacagtcttgtagaggcacagaaatcaaaagtgtag
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