Balaenoptera acutorostrata scammoni (minke whale): 103009047
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Entry
103009047 CDS
T03086
Symbol
SLC6A4
Name
(RefSeq) solute carrier family 6 member 4
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04721
Synaptic vesicle cycle
bacu04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
103009047 (SLC6A4)
04721 Synaptic vesicle cycle
103009047 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bacu02000
]
103009047 (SLC6A4)
Transporters [BR:
bacu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
103009047 (SLC6A4)
BRITE hierarchy
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GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
103009047
NCBI-ProteinID:
XP_007183901
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All DBs
Position
Un
AA seq
629 aa
AA seq
DB search
METTPLNSQELSAYKDGEDCQGNGVLQKGVPAPGDKAESGQISNGYSAVPSPGAGDDTQH
SIPAATTTLVAEVHPGERETWGKKMDFLLSVIGYAVDLGNVWRFPXICYQNGGGAFLLPY
TIMAVFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMA
WALYYLISSFAAQLPWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHR
SKGLHDLGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGAT
LPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDA
LVTSVVNCVTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAST
FFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWSKRREWFVLSVVITCFFGSLITL
TFGGAYVVKLLEEFATGPAVLTVALIEAIAVCWFYGINQFCSDVKEMLGFSPGWFWRICW
VAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPMYITYRLIITP
GTLKERLIKGITPETPTEIPCGDIHLNAV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttaaattcccaggagctatcagcatataaggatggagaagattgt
caaggaaatggtgttctacagaagggtgtccctgcccctggggataaggcagagtccggc
caaatctcgaatgggtactcagcggttccaagccccggtgcaggagacgacactcagcat
tccatcccggctgccaccaccaccctagtggctgaggttcatccaggggaacgggagacc
tggggcaagaagatggatttcctcctctccgtcattggctacgctgtggacctgggcaat
gtctggcgctttccctagatctgttaccagaatggagggggggcattcctcctcccctac
actatcatggccgttttcggggggatcccgctcttctacatggagctcgcgctgggccag
taccaccgaaatggatgcatttcgatatggaggaaaatctgcccgattttcaaagggatc
ggttacgccatctgcatcattgccttttacatcgcctcctactacaacaccatcatggcc
tgggcgctctactacctcatctcctcttttgcggcccagctgccctggaccagctgtaag
aactcctggaacactggcaactgcactaactacttctccgaggacaacatcacctggaca
ctccattcaacatcccctgcagaagaattttatacgcgccacgtcctgcagatccaccgg
tcaaaggggctccacgacctggggggcatcagctggcagcttgccctctgcatcatgctg
atcttcactattatctactttagcatctggaaaggtgtcaaaacatctggcaaggtggtt
tgggtaacagccaccttcccttacatcatcctttcaatcctgctggtgaggggggccacc
cttcccggagcctggaggggagttctcttctatttgaaacccaactggcagaaactccta
gagacaggggtgtgggtggatgcggccgcccagatcttcttctctctcggtcctggcttt
ggggtcctgctggcttttgcgagctacaacaaattcaacaacaactgttaccaagacgcc
ttggtgaccagtgtggtgaactgcgtgacgagcttcgtttcaggatttgtcatcttcaca
gtgctggggtatatggctgagatgaggaacgaagatgtgtctgaggtggccaaagatgca
ggccccagcctgctcttcatcacatatgcggaagccatagccaacatgccggcatccacg
ttctttgccatcatcttcttcctgatgttaatcacactgggcttggacagcacatttgca
ggcttggagggggtgatcacagccgtgctggatgagtttccacacatctggtccaagcgc
cgggagtggtttgtgctcagcgtggtcattacctgcttctttggatccctgatcaccctg
acttttggaggggcctacgtggtgaagctgctggaggagtttgccacgggacccgcagtg
ctcactgttgccctgatagaagcaattgctgtgtgttggttctatggcatcaatcagttc
tgcagtgatgtgaaggaaatgcttggcttcagccctggatggttttggaggatctgctgg
gtagccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagcccacca
cagctacgactttttcagtataattatcctcagtggagcatcatcctgggttactgcata
ggaacctcatctttcatctgcatcccgatgtatataacttatcggctgatcatcactcca
gggacacttaaggagcgtcttattaaaggtatcactccagaaacaccgacagaaattccc
tgtggggatatccacttgaatgctgtgtaa
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