Bombus affinis (rusty patched bumble bee): 126916334
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Entry
126916334 CDS
T09368
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126916334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126916334
Enzymes [BR:
baff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126916334
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
126916334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
126916334
NCBI-ProteinID:
XP_050577990
LinkDB
All DBs
Position
5:complement(9239457..9246129)
Genome browser
AA seq
1385 aa
AA seq
DB search
MVKEQFRETDVARKISHVSFGVDSRHNMERQAHIHVVAKNLYNQDVEHTPVPYGVLDRKM
GTCNNITNCVSCGKSLNECIGHFGYIDLELPVFHVGYFRSIIGILQSICKNCSRVMLSEA
DKKHYLARVLNPNLGYLTRKALRKQILDKAKKTTVCQYCRDLNGTVKKAGLLKIVHEKYK
GKKKIDAIVQQKLAEYNNVLEDNKALEGVLQSGLVNVLNPLEVQSILEKIPESDIPLLLM
NSECALPKDLILTRIPVPPICIRPSVVSDLKAGTTEDHLTMKLSEIVFINDVIQKHRQSG
AKVQMYNEDWEFLQLHCALYINSEMSGIPLNMQPKKSGRGLVQRLKGKQGRFRGNLSGKR
VDFSSRTVISPDPNLRIEQVGVPIHVAKILTYPERVNPSNIELMRKLVRNGPDIHPGANF
IQQGKTQFKKFLKYGNRQKIAQDLQYGDIVERHLRDDDVVLFNRQPSLHKLSIMAHKAKV
LDHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALILMGNKSNLVTPRNGELLIA
ATQDFITGGYLLTQKDMFLNKAQASQLAGCLLAGPDIAMSISLPEPAILKPSMLWTGKQI
FSLILKPNSTCNIKANLKTKGRAYTSNQELCINDSYVIIRNSELLAGTMDKSTLGSGSKQ
NIFYILLRDWGEDIATIAMWRLARMASFFLMNRGFSIGIGDVTPGQGLLKAKEKLLNAGY
SKCTEYICQMEEGRLVCQPGCSEEETLEAMILKELSVIRDHAGKACLKELHPSNSPLIMA
LSGSKGSFINISQMIACVGQQAISGHRVPNGFEDRALPHFERHSKIPAAKGFVENSFYSG
LTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCLHYDMTVRNSVGDIIQIL
YGGDGLDPTYMEGKDCPVDYKRVLDHVTAKSPCKNEEPLDGPDLIKATNELLGSKDCECL
SEEFKQELSTFLKGVARKIIHLRYNAPSNIPVIFQLERLTVSQLVEFIHTCKEKYMKAKI
EPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINANPKISTPIISA
ALENDVDPEYARRVKGRIEKTTLGEVTEYIEEVYLPDDCFLLVKLDIDRIKLLKLEVDVN
SIRYSICTSKLRLNPKLVNVRGDSIITVNPSKSKYSINYALTQLKETIPNIVIKGLPSVS
RAVIHNDDSSGKTRYKLFVEGNNMREVMATLGVLGRKTTSNNTIEVFKTLGIEAARATIM
TEIKLVMENHGMSIDRRHPMLVADLMTSRGEVLGITRQGLAKMKESVLNLASFEKTSDHL
FDAAYYGQKDVICGVSESIIMGIPVPVGTGIFKLLHKADKDEPRIKELIFDDPQFKKTTK
TTQIL
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaggaacaatttagagaaacagacgtagcacgcaaaatctctcatgtatcattc
ggagtggacagccgccacaacatggaaaggcaagctcatatacatgttgtggctaaaaat
ttatataatcaagatgttgaacatactccagttccatatggagttctcgacaggaaaatg
ggtacttgtaataatattaccaattgtgtatcatgtggtaaatctttaaacgaatgtatt
ggacactttggctacattgatttagaactgcctgtttttcatgttggttattttagatct
atcattggtattcttcaaagtatttgtaaaaattgttctcgtgttatgctatctgaagca
gacaaaaagcattatttagccagagtattaaatcctaatttgggatatttaacacgtaaa
gcattacgtaaacagattctggataaagctaagaaaactacagtttgtcaatattgtcgg
gatcttaatggaactgttaaaaaagccggtttacttaaaatagttcatgaaaagtataaa
ggaaaaaagaaaatagatgccattgttcaacaaaagttagcagagtataacaatgtgctt
gaggataataaagcattagaaggagtacttcaaagtggtttggttaatgtattaaatcct
ttggaggtacaaagcattctagaaaaaataccagaaagtgacattcctttattattgatg
aattcagagtgtgcattaccaaaagacttaatattgacaagaattcctgtgccaccaatt
tgtattagacctagcgttgtgtctgatttaaaagctggtacaacagaagatcatttaaca
atgaaattatcagaaatagtttttatcaatgatgttattcaaaaacatagacaaagtgga
gctaaagtacaaatgtacaatgaagattgggaatttctacaattgcattgtgccctttat
ataaatagtgaaatgtctggtataccccttaatatgcaaccaaaaaaatctggtagagga
ttggttcaaagattaaaaggaaaacagggtcgttttcgaggaaatttatccggtaaacgt
gtagatttttctagtcgtactgttatttcaccagatcctaatctgaggattgagcaagtt
ggtgtgcctattcatgttgccaaaattttaacatatcctgaaagagtaaatccatcaaac
atagaactaatgcgaaaacttgtaaggaacggtccagatatacatccaggtgcaaatttc
atacaacaagggaaaacacaatttaaaaaatttttaaaatatggtaaccgacaaaaaatt
gctcaagatttacagtatggtgatatcgtcgaaaggcatctgagagacgatgatgtagta
ttattcaacaggcaaccgtcgttgcataaattaagtatcatggcacataaagcaaaagta
ttagatcacagaacatttagatttaatgagtgtgtttgtacaccatataatgccgatttt
gacggagacgaaatgaatttacaccttccccaaaccgaagaagcaagagcagaggcttta
attttaatggggaataaatcaaatttagttacacctcgcaatggagaacttttaatagct
gcgacacaagatttcattactggtggatatctgctgacacaaaaggacatgtttttaaat
aaagctcaagcaagtcaactagctggttgtcttctagcaggacctgatattgccatgtct
ataagtcttcctgaaccagctattttaaagccaagtatgttatggacggggaaacaaatc
tttagtttaattttaaaacctaacagtacttgtaatattaaagctaatttaaaaacaaaa
ggaagagcttatactagcaaccaggaattatgtattaacgattcttatgttattatccgg
aattcagaattattagcaggaaccatggataaatcgactttaggttcaggatcaaagcag
aatatattttatattctattacgcgactggggcgaagatattgcaacaatagctatgtgg
cgactagcaagaatggcaagtttctttcttatgaatagaggtttttctattggtattgga
gacgttacaccaggacaaggacttcttaaagccaaagaaaagcttttaaatgccgggtat
tctaaatgtacagaatacatttgtcaaatggaagaaggacgtcttgtatgccaacctggc
tgttcagaggaagaaacattagaagcaatgatattgaaagaactttcagtaattcgtgat
catgctggtaaagcatgtttaaaagaactccatccaagtaacagtccattaattatggca
ttgtctggcagtaaaggaagctttatcaatatttctcaaatgattgcgtgtgtggggcaa
caagctattagcggtcatagagttccaaatggatttgaagacagagctctaccacacttt
gaaagacattcaaaaattcctgcagctaagggtttcgtagaaaattcattctattctggt
ctaacgccaacggaatttttcttccacactatgggtggaagagaaggtcttgtcgataca
gcagttaaaactgcagagactggttacatgcaacgacgactagttaagagtttagaagat
ctgtgccttcattatgatatgacagttcgtaattcagtgggggatattatacaaatattg
tatggtggcgatggtctagatcctacatacatggaaggaaaagattgcccagtggattat
aagagagtattggatcacgtaacagctaagtcgccatgtaagaatgaagaaccactagat
ggtcctgatctaattaaagctacaaatgaattactaggttccaaagattgtgaatgtctc
agtgaagaatttaaacaagaattatccacattccttaaaggtgtagcacgtaaaataata
cacctgcgatataatgctccatcgaatatacctgtaattttccaactcgaacgactcaca
gtttctcaattggttgaatttattcatacctgtaaagaaaaatatatgaaagcaaaaata
gaaccaggtactgctgtaggtgcacttgccgcacaaagtattggagaaccgggtacacaa
atgacattaaaaacatttcacttcgccggtgtagcatctatgaatattactcagggtgtg
ccgcgtattaaagaaatcattaatgcaaatcctaagattagtactccaatcatctcagca
gctttagaaaatgacgtagatccggaatatgctagaagagtaaaaggcaggattgaaaaa
actactttaggagaagtgacagaatatattgaagaagtttatttacctgatgattgtttc
ttattggtcaagttagatattgatagaataaaattattgaagttagaagtagatgttaac
tccatacgttattcgatctgtacatcaaaattaagactgaatccaaaattagtaaatgtt
agaggagattctattatcactgtgaatccaagcaagagtaaatacagcataaattatgct
ctcacacagcttaaagaaacaattccaaatattgttataaagggtttaccatcagtttct
agagctgtaattcataatgatgattcaagtggtaaaacaaggtataaattgtttgtagaa
ggaaacaatatgcgagaagtaatggcaactcttggcgttttgggcagaaaaacaacttca
aacaatactattgaggttttcaaaactttaggaattgaggctgcaagagcaactataatg
acagaaatcaaattggtgatggaaaatcatggaatgagtattgatcgaagacatccaatg
cttgtagcagatttaatgactagtagaggagaagtactgggtattacaagacaaggctta
gctaaaatgaaggaatctgtcttaaatttagcttcgtttgaaaaaacatctgatcatcta
tttgatgcagcttattatggtcaaaaagatgttatttgtggtgtgtctgaatcaatcata
atgggtattccagttcctgtaggaacaggaattttcaaattacttcacaaagctgacaaa
gatgagccaagaataaaagagttgatatttgacgatccacaattcaagaaaactacaaaa
accacacaaatattgtaa
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