Bombus affinis (rusty patched bumble bee): 126924016
Help
Entry
126924016 CDS
T09368
Name
(RefSeq) sphingosine-1-phosphate lyase isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff00600
Sphingolipid metabolism
baff01100
Metabolic pathways
Module
baff_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
126924016
Enzymes [BR:
baff01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
126924016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
DUF1512
SepSecS
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
126924016
NCBI-ProteinID:
XP_050593997
LinkDB
All DBs
Position
14:complement(11285962..11288987)
Genome browser
AA seq
565 aa
AA seq
DB search
MNVYFLGVNNMKQLINNYFEAKEPWQIVTITSTTILATVWLWNFVFQDEMNSKFCFLGLV
ERAKKQLFSLRNFIPAIRNKIDQELDKINQTFEQETLQRIKDIPFIVKLPEKSLEPKEIL
ERIKTCVQLAYCYLGDYDWESGKVSGAIYRVDINLLQLMGDIYSIASYTNPLHPDIFPGV
CKMEAEVVRIVCNLFHGDEDSCGTMTSGGTESILLACKTYRDYARNVKGIKNPEIVMPIT
AHSAFDKAAQYLKLKVRSVPVNQHSYTACIKSMEKAITRNTIMLIGSTPNFPYGTMDNIK
AISDLGVKYNIPVHVDACLGGFLICFMPNAGFNVPPCDFRLSGVTSISVDTHKYAYAPKG
SSLILYRNKKLRHYQYTITTDWPGGIYGSPTVSGSRAGGIIASCWATLMYFGYNEYLEST
KKIIETTKYIEQRLRKLDGIFIFGTPATSVIALGSNDFHIYKLSEALNVRGWNLNTLQFP
CGIHLCVTYVHTQLGVADQFLSDVETELSIILKNPEAPVDGKLAIYGMSQSIPDRSIVGD
FAKCFLDSIYFTPGNKTMVNNGSSI
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtatattttcttggtgttaataatatgaaacaactgattaataattattttgaa
gccaaagaaccatggcaaatagtgactataaccagtacaaccatccttgccacagtttgg
ttatggaattttgtctttcaagatgagatgaatagcaaattttgttttctaggtctggta
gaaagagcaaagaagcaactgtttagtttaaggaattttatacctgctattagaaataaa
attgatcaagaattagataagattaatcaaacgtttgaacaagaaacgttacagagaata
aaagatattcctttcattgtgaaacttccagagaaaagtttggaaccgaaagaaatatta
gaaagaataaaaacatgtgttcagttagcatattgttatttaggtgattatgattgggaa
agtggtaaagtgtctggagctatatatagggttgatattaatcttttgcaattaatggga
gatatttatagcattgcatcatatacaaatccattacatcctgatatttttcctggtgta
tgtaagatggaagcagaagtggtgagaatagtttgtaatttgttccatggagatgaagat
tcttgtggcactatgaccagcggtggtacggaatcgatcttattggcatgtaaaacatat
agggattatgcaaggaatgtgaaaggtataaaaaatccagaaatagtaatgcctataaca
gcacactctgcttttgataaagctgctcagtacttaaaacttaaagtacgttctgtccct
gtcaaccaacatagctatactgcttgtattaaatctatggaaaaagctattacaaggaat
acaataatgttaataggatcaacaccaaactttccgtatggaacaatggataatattaaa
gcaatttctgatctaggagtaaaatacaatattccggttcatgttgatgcttgtctcggt
ggatttttaatttgtttcatgccaaatgcaggttttaatgtaccaccttgtgactttaga
ctttccggagttacaagtatatcggttgatacgcataaatatgcatatgctccgaaaggt
tcttcgcttattctttatagaaataaaaagttaagacattatcaatatactataacaacc
gattggcctggtggtatatatggttcgccaactgtaagtggttcaagagctggtggaatt
atagcatcatgttgggctacattaatgtattttggttataatgaatatttagaatcgaca
aagaaaattatagaaactactaaatatatcgaacaacgattgagaaagttagatggaatt
tttatttttggtaccccggctacttcggttatagcattagggtcaaatgattttcacatt
tataaactttcggaagctctaaatgtaagaggatggaacttgaatacacttcagttcccg
tgtggcatacatctttgtgttacgtatgtccatacacaattaggtgtagcagatcaattt
ttaagtgacgttgaaactgaattaagtataatcttaaaaaatccagaagctcctgtcgat
gggaagcttgcaatttatggaatgagtcagagcataccagacagaagtattgttggcgat
ttcgcaaaatgtttcttagattctatatactttacgccaggaaataaaacaatggttaat
aatggatcgagtatctaa
DBGET
integrated database retrieval system
