KEGG   Bombus affinis (rusty patched bumble bee): 126928901
Entry
126928901         CDS       T09368                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit 1 isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
baff  Bombus affinis (rusty patched bumble bee)
Pathway
baff03030  DNA replication
baff03410  Base excision repair
baff03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:baff00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126928901
   03410 Base excision repair
    126928901
   03420 Nucleotide excision repair
    126928901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:baff03032]
    126928901
   03400 DNA repair and recombination proteins [BR:baff03400]
    126928901
Enzymes [BR:baff01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     126928901
DNA replication proteins [BR:baff03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    126928901
DNA repair and recombination proteins [BR:baff03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      126928901
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N Motilin_ghrelin
Other DBs
NCBI-GeneID: 126928901
NCBI-ProteinID: XP_050600714
LinkDB
Position
2:complement(11831340..11840433)
AA seq 2267 aa
MTSLQNTGKFRPFKENTGNNQSQEGNASGEISGGNRVNEVNENIRIDGLYGFHRVTDMKE
RIGFLINMHATEIMENDKRLMSGVDYYFLEEDCTRFKISYPYNPYFYILCKKDTYEEVST
GLNKKYNNLIHKVQTIYKEDLDLSNHLIGLKQKYLKISFINTVDLNKVRRGIMKAVKLNK
EREKHNTYYSNMLSDVLNTEQSTGDIKKQTIDFMDNILDIREYDVPHHVRVSIDMKICCG
NWYSVKTRGNDVPIITKRDDLIEPPDPIVLAYDIETTKLPLKFPDADTDQIMMISYMIDG
QGYLITNREIIANDIENFEYTPKPEFEGFFTVFNEPNEKATIKRFFDHINDIRPHIFVTY
NGDFFDWPFVETRAAFHNMDMKDRIGFSKNRDGVYSSRPAMHMDCLCWVRRDSYLPVGSQ
NLKAVAKAKLRYNPVELDPEDMCRLASEDPETLANYSVSDAVATYYLYYKYVHPFIFALC
TIIPMEPDEVLRKGSGTLCESLLMVQAFQANIIFPNKQEQEFNKFTKDGHLLDQETYVGG
HVEALESGVFRADIPCRFKIVPSAVEELINGVESALKHAIQEEEKVPIEMVTNFEEVVEE
ITMKLKGLRNQPLRLENPVIYHLDVGAMYPNIILTNRLQPSAMVDETVCAACNYNKPGAL
CQRKMEWMWRGEYFTATLSEYQRMQQQLENEKFPPQFPGGARRAYHELSKEEQVSYEKKR
LTEYCKKAYKKVKITSMEERTQTICQKENSFYVDTVRAFRDRRYEYKALTKVAKQEVAAA
VAKGDAADIKSAKNREVLYDSLQLAHKCILNSFYGYVMRKGSRWFSMEMGGIVCYTGAHI
IMRAREIIEQVGRPLELDTDGIWCVLPASFPDNVVVYTTHPKKKKLVVSYPNAVLNFMVK
DQFTNDVYHELVDPENLTYKIKSENSIFFEVDGPYLAMVLPAAKEEGKRLKKRYAVFNFD
GSLAELKGFEVKRRGELQLIKVFQTSVFESFLKGSTLEECYASVAKDADYWLDILYSKCA
DMPDSELFELISENKSMSRKLEEYGSQKSTSISTAKRLAEFLGDQMIKDAGLACKYIIAN
KPQGAPVTERAIPLAIFQSEPAIRKYYLRKWLKDSSLQSDDIRDILDWSYYIERLGSAIQ
KIITIPAAMQGLSNPVPRVKHPDWLHKRVMEKSATHKQKKITDMFTMMPKDNEKNVGDQD
IESSETCDIEDIAGKPSTSKQSLPIVNKRKRQLLERNEAENANRSWKEVLGSPPPMGTTK
EERLKWLEFHKQKWAHQAKQRAEYQKSKKSKRSNNDGDEVSWGVARDTNTSTLGGFFKRT
QRKLLMNPWQIIQISPTNKPGLYRLWVLVDKDLHQLRLIIPRIFYVNTRKPKPNPEPGKK
VSWKESKKVLPRSRPIYNLYQYTVPETQFQLYSQELLEDMSRPEIEGIYETQMSLEFRAI
LQLGCVCTVDPKAARTMADGADTFALDQLEYKSVAVQSYLKNLNETNYIFLYHHWSSNHQ
RALWGLFLNATKRAYIFVLDSVSSNQMPNMNTLYIQERDTVISTNGEDKVKFLPESMRFE
LKFETNFQQVCRIIQAVITTYKNEGHGPTVFIIQTALDKTTLVTHMPLLNDFPLISTYVQ
DIETLYNTLEWQKVGAKTMLRHYLKSQQIYELMTEQCRFLHVPIGNIPADPIVFGADLFF
ARHLQKNNFVLWCSPTEKPDLGGSENDDNRLLTDYEESLHSAANNAGTYSSVCIELEIES
LAVNTLLQHHHIHDIDGTSNFVAFHTQQQTSVQDMATHDGMTNIIPNYDETVLCSPAFRI
LRNMVNTWLLDVSVHKNIFADYQIIHFYRWLRSPSSLLYDPALKRTLHTYMKKLFAQLLA
EFKNLGSIIIFANFNKIIICTKKRTMSDALNYMEFVVQTIRNKELFHSIEITFEQCWEYL
TWLDVHNYGGIKGKLPKDMENTTDTNNENAEDENDGEPEIVMNWNLMECLPKEAACQSSF
TAIIAGYFHAIYQFILEHELNTTVRPRNLNNLSQLSHNCTTAQLGLGSLENTAEFAKKLI
KGDMSQKLFQIVQKIHKNLPEKTLTIEECPNLDLDGKDSKKINPALELIKSVCKVLSLDA
EVENEVYYLRTNMLKLIRVGSFSDLVEWKDPCISLVVPEIICKVCNHTRDIDLCKDNFCT
MDRDRYIWKCPLCKMDYDNDEIEFLLMDMLDHKSMAYMLQDLQCCKCNEIKRENMNELCS
CSGNFKTLIPKSEIEKFMKICKSVAIKSNMKTLLEIIQNTKVLVDSK
NT seq 6804 nt   +upstreamnt  +downstreamnt
atgacaagtttacaaaatacagggaaatttcgaccgtttaaggaaaatacagggaataat
caaagtcaagaaggaaatgcatcaggagagatttcaggtggcaacagggtaaatgaagtt
aatgaaaatataagaatcgatggtttatatggttttcatagagtaactgatatgaaggaa
agaataggatttcttatcaatatgcatgcaacagaaattatggaaaatgataaaagatta
atgagtggtgtggactattattttttagaagaagactgtactagatttaaaatttcgtat
ccttataatccatatttttatattttatgcaaaaaggatacatatgaggaagtttctact
ggtttaaataaaaaatataataatttaatacataaagtacagactatttataaagaagat
cttgatttgtcaaatcacctcattggtttaaagcagaaatatttaaaaatttcttttatt
aatactgtggacttgaataaagtcaggcgtggtattatgaaagctgtaaaattaaataag
gaacgtgaaaaacataatacctattattcaaacatgttatcagatgtattaaatacagaa
cagagtacgggagatattaagaagcaaaccatagattttatggataatattcttgatatc
agagaatacgatgtaccacatcatgttcgtgtctccatagacatgaaaatttgttgtggt
aactggtattctgtgaaaacaagaggaaatgatgtaccaataattacaaagagagatgat
cttattgaaccacctgatccaattgttttggcatatgatattgaaactacaaaacttcct
ctgaaatttccagatgctgatactgaccaaattatgatgatctcatatatgattgatgga
caggggtatttaataacaaatagagaaataattgcaaatgatatcgaaaattttgagtat
accccaaaaccggagtttgagggattttttacagttttcaacgaacctaatgaaaaggcc
acaataaaaagatttttcgatcacataaatgatattcgaccacatatattcgtaacatac
aacggtgattttttcgattggccatttgtagagactagagcagcttttcataacatggat
atgaaagacagaattggtttttcgaaaaatcgtgatggagtttacagcagtagaccagcc
atgcatatggactgtttatgttgggtcaggcgcgattcgtatcttcctgtaggttctcag
aatttaaaagctgtagcaaaggcaaagcttagatataatccagtggaactggatcccgaa
gatatgtgtagattggcgtctgaggatccagagactctcgcaaattattcagtttctgat
gcggttgcaacgtattatctttactataaatatgttcatcctttcatatttgctctgtgt
accattattcctatggaaccagatgaagtactcagaaaaggatctggtacattatgcgaa
tctcttttaatggtgcaagcttttcaagctaacattatatttcctaacaagcaggagcag
gaattcaacaaatttacaaaagatggtcatttattggaccaagaaacgtatgttggagga
catgttgaagctttagaatctggtgttttcagagccgatattccttgtcgttttaaaata
gtaccaagtgcagtagaagaattaataaatggcgttgaatctgcattaaagcatgctata
caagaagaagaaaaagtgcccatagaaatggttacaaattttgaggaagtggttgaagaa
attacaatgaaattgaaaggtttaagaaatcaaccattgagattagagaaccccgtaata
tatcacttagatgtcggtgctatgtatccaaatattattttaaccaatcgtcttcaacca
tccgcgatggtcgatgaaactgtatgtgctgcatgcaattataataaaccaggagcactt
tgccaaagaaaaatggagtggatgtggagaggagaatatttcactgcaactttaagtgaa
tatcaacgaatgcagcaacaacttgaaaatgaaaaatttccaccgcaattcccaggcgga
gctcgtagagcatatcatgaattatctaaagaggaacaagtatcgtatgagaagaaacga
ctcacagagtactgtaagaaagcttataagaaagttaagattactagcatggaagaaaga
acacaaacgatttgccaaaaagagaattcattttatgttgacactgtacgagcgtttaga
gataggagatatgaatacaaggcgcttactaaggtagctaaacaagaggtggcggcagcc
gtagcaaaaggagatgctgctgatattaagtctgctaaaaatcgagaagtactatatgat
tcattacaactggcacacaaatgtatcttaaattccttctatggatacgttatgagaaaa
gggtctcgatggtttagtatggagatgggtggcatagtatgttacacgggagcacacatt
attatgagagctagagaaattatcgaacaagttggtcgacctttagagttagatacggat
ggaatctggtgcgttctaccagcatcttttcctgataatgttgttgtttatactactcac
ccaaagaaaaaaaaattggtagtatcatatccgaatgctgttcttaattttatggtgaag
gatcaatttactaatgacgtataccatgaactcgttgatcctgaaaatcttacgtataaa
attaagagtgaaaactctatattttttgaagtggatggtccttatttagctatggtatta
cctgcagcaaaagaagaaggaaaaagattaaaaaaacgatacgcagtcttcaatttcgac
ggttctttagctgaactgaaaggttttgaagtaaaacgaagaggtgaacttcagctaata
aaagtttttcagacgtccgtattcgaatctttcttaaaaggtagcacattagaagagtgc
tatgcgtcagtagctaaagatgcagattattggcttgatattctttatagcaaatgtgca
gatatgccagattcggagttatttgaacttatatccgaaaacaaatcaatgtcacgaaaa
ttggaggaatatggaagtcaaaagtcgacgtctatttctactgctaaaagattagcggaa
tttttaggtgatcaaatgattaaagatgctggcttagcatgtaaatacattattgctaat
aaacctcaaggcgcaccagttacagaacgggcaataccattagcaatatttcaatcggaa
cctgcaataagaaaatactatttacgaaaatggttaaaagattctagtttacaaagcgac
gacatacgggatattttagattggagttattatattgaaagacttggaagtgctattcaa
aaaattattacaattccagcagcaatgcaaggattgtccaatccggttcctagagtgaaa
cacccggactggttgcataaaagagtaatggaaaaaagtgcaacgcataaacaaaaaaag
attactgatatgtttaccatgatgcctaaagataacgaaaaaaatgttggcgaccaagat
atagaatcatctgaaacatgcgatatagaggatatcgccgggaaaccctcaacttctaag
cagtcattgccaattgttaataaaagaaaacgacagcttctagaaagaaacgaagcagaa
aatgcaaatagaagttggaaagaagttctaggttcaccaccaccaatgggaacaacaaag
gaagaaagattaaaatggttggaattccacaaacagaaatgggctcatcaagcgaagcaa
agggctgaatatcagaagagtaagaagagtaagcgttctaataatgatggagatgaagtt
tcttggggtgttgcaagagataccaatacatctacattgggtggctttttcaagcgaact
caaagaaaattgcttatgaatccatggcaaattattcaaatatcaccaacaaacaagcct
ggtttatatcgattatgggtattagtcgataaagatttacatcaattgcgtcttataata
cctcgtatattttatgtaaatactcgtaaacctaaacctaatccagaaccaggtaaaaaa
gtatcttggaaagaaagcaagaaagttcttccacgatctcgacctatatataatttatat
caatatactgtgccggaaacacagtttcaattatacagtcaggagcttttagaagatatg
agtagaccagaaattgaaggaatttatgaaactcaaatgtcactagagtttagagctatt
cttcaattaggatgcgtttgtacagttgatcctaaggcagcacgaaccatggcagatggt
gcagatacatttgccctagatcagttagaatacaagagtgttgctgtgcaatcatatctt
aaaaatcttaatgaaactaattatattttcttatatcatcattggagttcaaaccatcaa
agagctttatggggactgtttttaaatgcaactaaaagagcttatatatttgttttggat
tctgtttcgtcaaatcagatgcctaatatgaacacgttgtacattcaagaacgggataca
gttatatccacaaacggggaagacaaagtaaaatttttaccagagtcgatgcgattcgaa
ttaaaatttgaaacaaactttcaacaagtctgtcgtattatacaagcagttataactaca
tataaaaacgagggacatggtccaacagtatttattattcagacagctttagataaaacg
acattagtaactcacatgccattacttaatgactttcctctaattagcacctatgtacaa
gatattgaaactttatacaatacactggagtggcagaaagttggtgcaaaaaccatgtta
cgtcattaccttaagagtcagcaaatttatgaattaatgacagaacaatgtagattcctt
catgtgccaattggaaatattcctgcggatcctattgtttttggtgcagacttatttttt
gcaagacatttgcaaaagaataactttgtattatggtgttctccaacagagaaaccagac
ttgggtggcagcgaaaatgatgataacagattgttgacagattatgaagaaagtttacat
tctgctgcaaataatgccggaacttattctagtgtttgtattgaattggagatagaaagt
ttagcagtaaatacattattacagcatcaccatattcacgatattgatgggactagtaat
tttgttgcattccacactcaacaacagacatctgttcaagatatggcaacacatgatggc
atgacaaatataattcctaattacgacgaaactgttctttgcagtcctgcttttagaata
ttgcgaaatatggtaaacacatggctgctagatgtatcagttcataaaaatatatttgca
gattatcaaattattcatttttacagatggttacgttcgcccagttctttactttacgat
cctgctttgaaaagaactttgcatacctatatgaaaaaattattcgcacagttattagca
gaatttaaaaatctgggatccataattatttttgccaattttaataaaatcatcatttgt
accaagaaaaggacaatgagtgatgcattaaactatatggaattcgttgttcaaacaata
cgcaataaagaactattccacagtattgaaataacttttgaacagtgttgggagtattta
acatggcttgatgtacataattatggaggtataaaaggaaaattaccaaaagatatggag
aatactacagatacaaataatgaaaatgctgaagatgagaatgatggtgagcctgaaata
gtcatgaactggaatttaatggagtgtctccccaaagaagctgcatgtcaatcaagcttt
actgctataatagcgggatacttccatgcaatttatcagttcatattggaacacgaattg
aatactactgtaaggcctaggaacttaaataatttaagtcaattatcacacaactgcaca
actgcacaacttggattaggatcacttgagaatactgcagaatttgctaaaaaactgata
aagggagatatgtcccaaaaactattccaaattgtacagaaaatacataaaaatctccca
gaaaaaacattaacaattgaagaatgtccaaacttagatttagatggtaaagacagtaag
aaaattaatccagcattggagttgataaaatcagtttgtaaggttttatctctggatgca
gaagttgaaaacgaagtatactatttgcgaacaaacatgttaaaactaattagagttggc
agtttcagcgatctagttgagtggaaagatccgtgcatttctttagttgtgcctgaaatt
atttgtaaagtatgtaatcacacaagggacatcgatctttgcaaagataacttttgtacc
atggatcgggataggtacatatggaaatgtcctctttgtaaaatggactatgacaatgat
gaaatagagttccttttgatggacatgttagatcataaaagtatggcttatatgttgcaa
gatttacaatgttgtaaatgtaacgaaattaagagggaaaatatgaacgaactttgttct
tgttctggtaattttaaaactttgattcctaaaagtgaaatagagaagtttatgaagatc
tgtaaatctgtggctataaaatctaatatgaaaacattgttagaaataattcagaataca
aaagttcttgtagattcaaaataa

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