Bicyclus anynana (squinting bush brown): 112050665
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Entry
112050665 CDS
T07476
Name
(RefSeq) probable DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112050665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bany03400
]
112050665
DNA repair and recombination proteins [BR:
bany03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112050665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
AAA_29
Motif
Other DBs
NCBI-GeneID:
112050665
NCBI-ProteinID:
XP_023944741
EnsemblRapid:
LOC112050665
UniProt:
A0A6J1NNI7
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All DBs
Position
22:complement(6827502..6844383)
Genome browser
AA seq
1119 aa
AA seq
DB search
MSKRNSNPASNTLFNYFTKTPPSNKKVKLNGDAETSAKTNSPVSIKEKRNESKKRERQPT
KSPDLTKNDSEDEAPISVKKRKRIRLNPVDSDDSDVENKVDNKIEAPKEKVSLEKKLQES
FKYEPGDSPKGNKTNRVIPNDTQIKTEPQDTPVSADEGNWVHCKLDWLKPDKIRDAHKRK
ADHPDYDPSTLYVPPEFLKSQTPAHKQWWEMKTSHYDCVLFFKVGKFYELYHMDAAVGVN
ELGFSYMKGEFAHSGFPESAYARMVSTLVSKGYKVARVEQTETPDMMQERCRKNGLTSKY
DKVVRREICQVSLRGAQALGLQDSGPAQAASEHMLAIAEEESNGRSTYGVCFIDTTIGQF
HMGQFTDDKHSSRLLTTLAHYPPALIIFDRKHTSPRTSKLLSTHCHNARREPTNMWPPEK
TLKLLAEKYYCTDADGEWPEGLRHFLHDADALGLTPAANCYLAVKALGGCVSYLNDCLLD
IQILGMAQFEEYSPPDVLNTTLTPEDKDENQWTGGNTMVLDAITLRNLRIVQDEGCLYER
LNFCSTPMGKRMLYQWVCSPSCNLSVIKERQDAIKELLENQELCQDAKNILTTLPDLDRL
LAKIHALGNFKKSRNHPDSRAIFYEEKIYSKRKVLDFISVLNGFGAALKLAELFSCTESD
MLKTITQCSPDGRFPDYRSTLKFFKEAFNQKEAEKEGRILPGEGVDHEYDSTLRTIKEIE
DDLKEYLEEQEKYFRCRLHYVGTDKKRYQIEVPQSAAPKAGSEYHLEGARKGFKKFSTSE
TKDLLARMIAAEEQKTNVLKDLSRRIFEKFSADHNQWESAIKCIAMLDILLSFAEFARQQ
SGDVCLPDVTYEKGQKPYIDIVEGRHPCIPIANDFIPNDTQLGMGNARLLLLTGPNMGGK
STLMRQVALLTVLAHLGSYVPAQECRLSLVDRIFTRLGASDDILSGQSTFLVEMNETAAI
VRHASVHSLVLLDELGRGTSTYDGTAIASGVCVELAERGCRVVFSTHYHSLVHHLAAHPG
VQLGHMACMVETDETTPDDEENIPEETITFLYKLSPGACPKSYGFNAARLAGIPREITAR
AHQVSRNLEKEATCVRAFRDILRMNSAVELRKMLSALSI
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgtaatagtaacccagcttcgaatacgttgtttaattatttcaccaaaaca
ccacccagtaacaaaaaagtaaaactgaatggtgatgcagaaacttccgccaagactaac
tcccccgtgagcattaaggagaagagaaatgaaagtaaaaaacgcgaaaggcagcctacc
aaatctccagatttgacaaagaacgacagtgaggatgaagcacccatatctgtcaagaag
aggaaacgaattagacttaatcctgtggactctgacgattcagatgttgaaaataaagta
gataacaaaattgaggcacccaaagagaaagtgtcccttgagaagaaattacaagaaagt
ttcaaatatgaaccaggagattcaccaaaggggaataaaaccaacagagttatacctaat
gatactcaaataaaaactgaacctcaagacaccccagtgtcagcagacgaaggcaactgg
gtgcactgcaaactggattggctgaagcctgacaagatacgagatgcacacaaacgcaag
gcagaccacccagactatgacccctctacattatatgtgcctcctgagtttctcaagtca
cagactccagcacataaacaatggtgggagatgaaaacgtcgcattacgactgtgtgctg
ttcttcaaagtcggcaagttttacgagctctaccatatggatgctgcggttggggtcaat
gaactcggcttttcttacatgaagggtgaattcgctcactctggtttccccgagagcgcg
tacgcgcgtatggtgtccactttggtgtccaagggatacaaagtggcgagagtggaacag
acggagacacccgatatgatgcaggagaggtgcagaaagaacggcttgacgagtaaatac
gacaaggtagtgcggcgtgagatctgccaagtgagcctccgcggcgcgcaagccctaggg
ctgcaggacagcgggcctgcgcaggccgcctcggaacacatgctggcgatcgcagaagag
gaaagtaatggtcgcagcacatacggcgtttgcttcatagacaccacgatagggcagttc
cacatgggccagttcacagacgacaaacactcgtccaggctactgactacactcgctcac
tatccgcctgcactgataatctttgaccgcaaacacacgagtcctcgcacaagtaaactg
ttaagcacgcattgccacaacgctaggagagagcctaccaacatgtggccaccggagaag
accctcaaattgttagcagagaaatattactgcaccgacgctgatggggagtggcctgaa
ggattgcgacactttctacatgatgcggatgcattaggtctgacacctgccgctaattgt
tacctagcagtcaaagctctcggaggatgtgtatcatacctcaatgactgtcttctagac
atacaaatactaggcatggcacaattcgaagagtattcacccccagacgttctaaataca
accttaacaccagaagacaaggacgaaaatcagtggaccggtggtaatactatggtactt
gatgctataaccttgaggaatttgagaatcgttcaagacgaagggtgcttgtatgagagg
ttgaatttttgttcaacgcctatggggaaaagaatgctttaccagtgggtgtgttctcca
agttgtaacctgtcagtgatcaaagagaggcaggatgccatcaaagagctgctcgagaac
caagagctttgccaggatgctaagaatatactgaccactttgccggacttggacagacta
ttggccaaaatacacgccctaggaaatttcaaaaaatccagaaaccatccggattcgcga
gctatattctacgaggagaaaatctactccaaacggaaagtcctcgactttatatcagta
ctcaacggtttcggtgcggcgctgaaacttgcggagttgtttagttgtacggaatctgat
atgttgaagacaataacccagtgcagccccgatggaagatttcctgactatagaagcacc
ttgaaattctttaaggaagccttcaatcagaaagaagccgaaaaagaaggtcgtatactg
cctggtgaaggcgtcgaccatgagtatgacagcacgcttcgaactatcaaggaaatcgaa
gacgacttgaaagagtacctcgaggaacaagagaaatacttcagatgtaggcttcattac
gtgggtactgataagaagcggtatcagattgaagttccccagagcgcggcgcccaaagct
ggatcagagtatcacttggaaggcgcacggaaagggtttaagaagttctccacctccgag
acaaaggatctcctcgctagaatgatcgctgcagaggagcaaaaaaccaacgtgttgaag
gacttgagtcgtcgaatattcgagaagttctcggcggatcacaaccagtgggagagcgct
ataaaatgtatagcgatgctggacattttgctctcgtttgcggagttcgcgcgacaacaa
agcggtgacgtttgtttgccagatgtcacgtatgaaaaagggcaaaagccttatatcgat
atagttgaaggcagacacccgtgcattcccattgccaacgacttcataccgaacgacacc
cagctgggaatgggcaacgctcgcctgctgctgctcactggccccaacatgggcggcaag
tccactctgatgcgacaagtggcactcctcactgtactggcgcatttgggcagctacgtg
ccagctcaagagtgccgcctcagtctggtggaccgcatcttcacccgcctgggcgcgtcg
gacgacatcctctccgggcagtcgaccttcctcgtagagatgaacgagaccgccgccatc
gtcagacacgcctccgtgcactcgctggtgttgctcgatgagttgggtcgaggcacatcg
acgtacgacggcacggcgatcgcgtcgggcgtgtgcgtcgagctggcggagagaggctgc
cgggtggtgttctctacccactaccactcgctggtgcaccacctggccgcgcatcctggc
gtgcagttggggcatatggcgtgcatggtggaaacggacgaaacaacgccggacgacgaa
gaaaacatacccgaggagacaatcacgttcctctacaaactgtcccctggggcttgtccc
aagtcgtacggcttcaacgcggccagactggcggggatcccccgggagatcaccgcgagg
gctcaccaagtgtcccggaacttggagaaggaggcgacgtgtgtgcgcgcctttagagac
atactcaggatgaacagtgctgtggaattacgcaaaatgttgtccgctttgagtatttga
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