Bicyclus anynana (squinting bush brown): 112054730
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Entry
112054730 CDS
T07476
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
bany
Bicyclus anynana (squinting bush brown)
Pathway
bany03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112054730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bany03021
]
112054730
Enzymes [BR:
bany01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112054730
Transcription machinery [BR:
bany03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
112054730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
112054730
NCBI-ProteinID:
XP_052743983
EnsemblRapid:
LOC112054730
LinkDB
All DBs
Position
21:13887019..13911320
Genome browser
AA seq
1386 aa
AA seq
DB search
MPKEQYRETYFGRKISHVTFNVDSASDIQQAAHIQVITKNLYAQDGQRVPASYGVLDRRM
GTNAKDANCETCGLGLADCVGHYGYIELALPVFHVGYFRSIITILQTICKNCAKVMLQET
VKKSFRRKFMNPELSYLHKKNLRAAVLKKAKTCTKCPYCDALNGIVKKSPAGILKIIHDK
YRMKKPNDPIVQKVLKEFNIAVESNKELATMINSGLIIELTPLEVINLFRRIPDEDIPLL
GMNVKSSRPEDLILTRLPVPPLCIRPSVASDIKAGTNEDDLTMKQSEILLINDVITRHMA
SGGKSELVQEDWDYLQLHAALYINSEMSGIPLSMQPKKPGRGLVQRLKGKQGRFRGNLSG
KRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRQLVCNGPDVHPGA
NYVQQRGLSHKKYLKYGNREKIAQELKCGDVVERHLVDGDVVLFNRQPSLHKLSIMCHRA
RVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGNKSNLVTPRNGELL
IAATQDFITGGYLITQRDTFFTRAEAQQLACCLLAGPDAAMRIDMPPPAILKPRMLWTGK
QIFSLIMKPNKRCEVKANLETKGKNYTSNQDMCVQDSYVIVRNSELVCGSMDKSTLGSGT
KNSIFYILLRDWGEEYAVRSMWRLARMASYYMMNRGFSFGIIDVTPGKKLIEAKNKLLES
GYSKCDGYILEMEKGTLQCQPGCTMEETLEAVMLSELSSIRELAAKACFRELHPTNAPLI
MAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKIPAARGFVENSFY
SGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLHYDMTVRNATSEVVQ
FRYGSDGLDPSYMEGRDQPVELRRVLAHVRALCQSRDEEALDGDGIVVAAEETLALDDFK
TCPAEFKAEMLTFLKKLAARVRSLRARYAACGRVSQQLERLTLTQLVRFVRVCHDKYQRS
IIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASKNISTPII
TAELTDPLDQEFARRVKGRVEKTTLGEITTYIDEVYLPNECFLLVRLDAERIRLLCLEVN
VHSIVYSICTSKLKVKPSNVLAVSEWAIKVYAEAGKHGGWLNMALQQLCRQLPAVVVKGL
SRVSRAVIACDDSGSINKYKLCVEGDGLRDVIATYGVDGRKTSSNNILEVYQTLGIEAAA
STIMSEIEAVMAGHGMAVDRRHVALLAAQMCARGEVLGITRYGLARMKESVLNLASFEKT
ADHLFDAAYYGQRDPIEGVSECIIVGAPAGIGTGVLQLLHRHERLAAASPPRLLFDDPLY
HPSIWE
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagaacaatatcgtgaaacatacttcggtagaaaaatttcccatgtgaccttc
aatgtggacagtgcatcggatatccagcaggcagcacatatccaggtcatcacaaagaac
ttgtacgctcaggatggacagagggtgccagccagctatggagtacttgacagaagaatg
ggcacaaatgccaaggacgccaactgtgagacgtgtggcctgggactggcggactgtgtg
ggtcactacgggtacatagagctggcgctgccagtgttccacgtggggtacttccgctcc
atcatcaccatactgcagactatatgcaagaactgtgccaaggtcatgcttcaagagaca
gtgaagaagtcctttcgccgcaaattcatgaaccccgaactgtcttacctacacaagaaa
aacctacgcgctgcagtccttaagaaagcaaagacttgcacaaaatgcccgtactgtgat
gcactgaacggcatcgtgaagaaaagtcccgctggtattctgaagattatacatgacaag
tataggatgaagaagcccaatgatccaatagtccagaaggttctgaaggagttcaacata
gctgtggagtccaataaggaattggcgacaatgattaatagtggattgattattgagctt
acacctttagaggttataaatctattccgccgtattccggacgaggacataccacttctg
ggcatgaacgtgaagagttccagacctgaggatctgatcctgactcggctgcccgtgccg
ccgctgtgtatcaggccgagtgtcgcttctgacattaaagctggaactaacgaagatgac
ctcactatgaagcagtccgagatcctcctcatcaatgacgtcataactcggcacatggcg
agcggcggcaagagcgagctggtgcaggaagactgggactatctgcagctgcacgccgcc
ctttacatcaacagcgaaatgtctggcatccctctctcgatgcagccgaagaagcctggt
cgtggtctggtgcagcggctgaagggcaagcagggacggttccgaggcaacctgtccggc
aagcgcgtggacttctccagccgcaccgtcatatcgcccgaccctaacctacagatccag
gaggtgggagtcccggtgcacgtggcgaagatcctcacgtacccggagcgcgtgttccca
gccaacctgcagtggctgcgccagctcgtgtgcaacgggcccgacgtgcaccccggcgcc
aactacgtgcagcagcgcggcctcagccacaagaagtacctcaagtacgggaacagggag
aagatcgcgcaggagttgaagtgcggcgacgtagtggagcgccacctggtggacggcgac
gtggtgctgttcaaccggcagccgtccctgcacaagctgtccatcatgtgccacagggcg
cgcgttcagccgcagcgtacgttcagattcaacgaatgcgtgtgcacgccgtacaacgcg
gacttcgacggcgacgagatgaacatgcacctgccgcagacggaggaggcgagggccgag
gcgcttatacttatggggaacaaatcaaacttggtgacacctcgtaacggcgagctcctc
atcgcggctactcaggacttcatcaccggcggctacctcatcacgcagcgcgacacgttc
ttcacgcgggcggaggcgcagcagctggcctgctgtctgctcgccgggccggacgccgcc
atgaggatcgacatgccgccaccagcgatactgaagccgagaatgctgtggactgggaag
cagatatttagtttgataatgaagccgaacaagcgctgcgaggtgaaggccaacctggag
acgaagggcaagaactacaccagcaaccaggacatgtgcgtgcaggactcgtatgtaata
gttagaaactcagagttggtttgcggttcgatggacaagagtaccttgggctcgggcacc
aagaacagcatcttctacatcctgctgcgggactggggcgaggagtacgctgttaggagc
atgtggaggctagcgcgcatggcgtcctattatatgatgaaccgcggcttcagcttcggc
atcattgatgtgacgccggggaagaagcttatagaggccaagaacaaactgttggagtct
gggtactccaagtgtgacggctacatcctggagatggagaaaggcacgctgcagtgccag
cccggctgcaccatggaggagaccctggaagctgtcatgctcagcgagctcagtagtatc
agagagttggcggctaaagcctgttttcgtgagctgcacccaacaaacgcgccccttata
atggcgcagagcggatccaagggctccaacatcaacatatcgcaaatgatcgcgtgcgtg
ggccagcaggcgctgaacggcaagcgcgtgcccaacgggttcgaggaccgctcgctgccg
cacttcgagagacattcgaaaatcccagcagcccgtggtttcgtagaaaacagcttctac
tccggtctgacccctacggagttcttcttccacaccatggggggtcgagagggactcgtg
gacactgccgtcaaaactgccgagacggggtaccttcaacgacgacttgtgaagtcgctg
gaggacctggtgctgcactacgacatgacggtgcgcaacgcgaccagcgaggtggtgcag
ttccgctacggcagcgacggcctggacccctcgtacatggaggggcgcgaccagcccgtg
gagctgcgccgcgtgctggcacacgtgcgcgccttgtgccagtccagggacgaggaagct
ttagacggcgacggcatagtggtggcggcggaggagacgctcgcactggacgacttcaag
acctgccccgctgagttcaaagccgaaatgctcacattcctcaagaagctggcagcgcgc
gtgcgcagcctgcgtgcgcggtacgcggcgtgcgggcgcgtctcgcagcagctggagcgg
ctgacgctgacgcagctggtgcgcttcgtgcgcgtgtgccacgacaagtaccagcgcagc
atcatcgagcccggcaccgccgtcggcgcgctggcggcgcagagtatcggcgagccgggt
acgcaaatgaccttaaaaacgttccacttcgccggcgtggcctccatgaacatcacgcag
ggcgtgccgcgcgtcaaggagatcatcaacgcgtccaagaacatctccacgcccatcatc
acggcggagctcaccgacccgctggaccaggagtttgcgaggagggtcaagggaagagtg
gagaagacaacgttgggtgagataacgacatacatcgacgaggtgtatctccccaacgag
tgcttcctgctggtgcgactggacgccgagcggatcagacttctgtgcttggaggtcaac
gttcattccatcgtttactctatatgcacatcgaagctcaaggtgaagccgtccaacgtg
ctggcggtgtcggagtgggcgatcaaagtgtacgccgaggcgggcaagcacggcggctgg
ctcaacatggcgctgcagcagctgtgccgccagctgcccgcggtcgtggtgaaggggctg
agcagggtctcgcgcgcggtcatcgcttgtgacgactcgggctccatcaacaagtataaa
ctgtgcgtcgaaggcgacggcttacgtgacgtcatcgctacgtacggagtcgacgggagg
aagacgtcctccaacaacatccttgaggtgtaccagacgctgggcatcgaggcggcggcg
agcaccatcatgagcgagatcgaggcggtgatggcgggccacggcatggcggtggaccgg
cgccacgtggcgctgctagcggcgcagatgtgcgcgcgcggcgaggtgctgggcatcacg
cgctacgggctcgcgcgcatgaaggagtccgtgctcaatctggccagcttcgagaagacg
gccgaccacctgttcgacgcggcgtactacgggcagcgcgaccccatcgagggcgtgtcg
gagtgcatcatagtgggcgcgcccgccggcatcggcaccggcgttttgcagctgctgcac
cgccacgagcgcctcgccgccgcctcgccgccgcgcctgctgttcgacgacccgctctac
cacccctccatatgggaataa
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