Bacillus amyloliquefaciens DSM 7: BAMF_3553
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Entry
BAMF_3553 CDS
T01321
Symbol
rpoE
Name
(GenBank) RNA polymerase (delta subunit)
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
bao
Bacillus amyloliquefaciens DSM 7
Pathway
bao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BAMF_3553 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bao03021
]
BAMF_3553 (rpoE)
03400 DNA repair and recombination proteins [BR:
bao03400
]
BAMF_3553 (rpoE)
Transcription machinery [BR:
bao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BAMF_3553 (rpoE)
DNA repair and recombination proteins [BR:
bao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BAMF_3553 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
HEPN_MAE_28990
Motif
Other DBs
NCBI-ProteinID:
CBI44679
UniProt:
A0A9P1NJG7
LinkDB
All DBs
Position
complement(3605086..3605613)
Genome browser
AA seq
175 aa
AA seq
DB search
MSIKQYSQEQLKQMALVEIAHEIFSEHKKPVPFQELLNEIISLLGVTKEELGDRIAQFYT
DLNIDGRFIALSDQTWGLRSWYPYDQLDEETQPTVKAKKKKAKKAVEEDLDLDEFEEVDE
DDIDLDEMEEDIDLDADSFDDEDIDEEDDDELEIEDDMIEEDEEEYDDEDEDRKD
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
ttgagtatcaaacaatattctcaggaacagctgaagcagatggctttagttgaaatcgct
cacgaaattttctcagaacataaaaaaccggttccgttccaggagctgctgaatgaaatt
atctccttgctcggtgttacgaaagaggaactgggtgaccgtatcgcccaattttatacc
gacctcaacattgacggccgcttcattgctctgtcagaccagacatgggggcttcgcagc
tggtatccgtacgatcagctggacgaagaaacacagccgactgtaaaagcgaaaaagaaa
aaagcgaaaaaagccgttgaggaagatcttgatcttgacgaattcgaggaagttgatgaa
gacgacatcgatctcgatgaaatggaagaagatattgaccttgacgcagacagctttgac
gacgaagatatcgatgaagaagatgacgacgagcttgagatcgaagacgatatgattgaa
gaagatgaggaagaatatgatgatgaagacgaggatcgcaaagactga
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