Bifidobacterium bifidum BGN4: BBB_0114
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Entry
BBB_0114 CDS
T02135
Symbol
hgiDIM
Name
(GenBank) modification methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
bbf
Bifidobacterium bifidum BGN4
Pathway
bbf00270
Cysteine and methionine metabolism
bbf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bbf00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
BBB_0114 (hgiDIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbf03000
]
BBB_0114 (hgiDIM)
03032 DNA replication proteins [BR:
bbf03032
]
BBB_0114 (hgiDIM)
03036 Chromosome and associated proteins [BR:
bbf03036
]
BBB_0114 (hgiDIM)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
bbf02048
]
BBB_0114 (hgiDIM)
Enzymes [BR:
bbf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
BBB_0114 (hgiDIM)
Transcription factors [BR:
bbf03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
BBB_0114 (hgiDIM)
DNA replication proteins [BR:
bbf03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
BBB_0114 (hgiDIM)
Chromosome and associated proteins [BR:
bbf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
BBB_0114 (hgiDIM)
Prokaryotic defense system [BR:
bbf02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
BBB_0114 (hgiDIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AFL03711
UniProt:
I3WFP8
LinkDB
All DBs
Position
complement(135744..136712)
Genome browser
AA seq
322 aa
AA seq
DB search
MKSFYAPSEKRVSQSEPEPDGPSVIDLFAGCGGLSRGFRNAGYNVLAGYDNWDPAIRTYN
HNLPERAYKLDLSDVDLTIRTIEASGFCFDGIIGGPPCQDFSSAGKRKEGARADLTEKYA
TIVAHFRPSFFVMENVARAKTATAFRHAVEILTEAGYGITEHVLNAAYCGVPQARKRLIT
VGFLNGNMDNEFEEYLTAHLSDRPMTVRNYFGESLGTQYYYRHPRSYARRAVFSIDEPSP
TIRGVNRPVPQGYPGHPGDAAPVSEARPLTTVERARIQTFEDFEFLGSKTDVEQLIGNAV
PVNLAKYVGASVRSYLADNLTA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagcttttatgccccatcggagaagcgtgtttctcagagtgagcctgagcctgac
ggaccctctgttattgacctatttgctggttgcggcggcctgtcgcgaggttttcgcaat
gcgggatataatgtgctagctggatatgataattgggatcccgctattaggacatataac
cacaacctgccagagcgggcatacaaactcgatttgtccgatgttgatttgacgataagg
acaatagaggcctccggcttttgcttcgacggcattataggagggcctccatgccaagat
ttttccagtgccggaaaacgaaaagaaggcgctagagctgatttaactgaaaaatatgcc
actatagttgcacatttcagaccaagtttttttgtcatggagaatgtcgcgagagcgaaa
actgccaccgcattccgccatgccgttgaaattttgactgaggcgggctacggtatcacc
gaacatgttttgaacgctgcatattgcggtgttccacaagcccgaaaacgtcttattacg
gttggtttccttaacggcaacatggacaatgaatttgaggaatatctcaccgcacatctc
tcagacagaccgatgactgtcagaaattactttggagagtctttaggaactcagtactat
tatcgccatccgcgttcatatgcgcgtcgtgctgttttttcgatagacgagccatcccct
acgatacgaggagtgaatcgtcccgtaccgcagggttatcccggccatccaggtgacgct
gcacctgtatctgaagcgaggccacttactacagtggaacgcgcccgtatacagacgttc
gaagattttgagtttcttgggagcaaaacagacgtggagcagctaataggcaatgctgtg
cctgttaatctcgcgaagtatgtgggagcctccgtgagatcctatttagctgacaatctc
acagcctaa
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integrated database retrieval system
