Babesia bigemina: BBBOND_0201970
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Entry
BBBOND_0201970 CDS
T08062
Name
(RefSeq) DNA-directed RNA polymerase, beta subunit, putative
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
bbig
Babesia bigemina
Pathway
bbig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBBOND_0201970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbig03021
]
BBBOND_0201970
Enzymes [BR:
bbig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBBOND_0201970
Transcription machinery [BR:
bbig03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
BBBOND_0201970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
24563581
NCBI-ProteinID:
XP_012767226
UniProt:
A0A061DBB9
LinkDB
All DBs
Position
II:complement(485325..489365)
Genome browser
AA seq
1271 aa
AA seq
DB search
MTEFNVNRVSAAHSHVDSFNAFIDHYSKHVVKRIPPVYVSADADYLKYLFNTSEKPHFKF
SIDVQISVLSLRIDYPTRPSSECLGSDTRMFPRHAKSAHTTYEAPLVVKFGLKVPGIDGV
LTKEIVVGFLPIMVKSKRCNLDGLSPEGMVQQGEDVDETGGYFVIRGNERILRQLIVLRS
NYPLAIKSENNRNKHALFTDYSIMMRSQCCDDGCSVSNILYLTVNKRCVFRTIVKSSVVL
IPFGLLLRATMPFMSDEELKRRLLEDALGDVELTVYYHRFFLDMTERDLLLSDIDFKENR
YLYRLGSACWTQIQQYMPPGATYEECGAYLLRNYVLLQAKTNSEKFDTLMYMFKKLIKVS
RGETQTENYDSFAFQELLLPGQIYSCILKESLYVALLKIRSIYQAELIELCKNISGGAAR
RSKRQVVEMELGSHDPKQLMRQLLERAELFSYAVDKVAPDITKKLHYFLATGNATTTHFE
LPQSSGLTVVAERINYHRSVHRGSIFAKMRSTEVRKLLGETWGFICPVHTPDGAPCGLLL
HLTQYAIPVTDADCGSATDAVKSFLRHQGYHVDFTGNEAVSQFWQSGTNDSGRIPVLVDG
IPVCNVPMADAHRLYCEIKRAKRNEIFGLKQHYELVALPDCKGQYTSLMVLTYPGRVIRP
VRCVKTGIIEWIGPIAQLWSTIAVNEEELKLSHKILDESKSRKSSKALSTSEAIEKYKAG
SISEPKEGSTLDNVPVKYEYVEVSPTAILSVTAALTPFSNHNQSPRNMYQCQMLKQSMGV
PYHCEQFRSDVKAYRLLFPQKPLVTTEEYRRMKYEDYPTGMNAIVAVIAHTGFDMEDAMI
INKSSLERGAFHGCIYKTKVIDSMPPNAKMREGQYYFNNTNHLGSKIIPSLDKDGLPSVG
SRVRNGTIICRVEARERIDGGHHTTDRVEKYHDEDAVVDQVTMIGASDANAADRAGASGL
KCNRATIKFRIVRNPIVGDKFASRHGQKGILSMAWPAEDMPFLESGITPDIIFNPHGLPS
RMTIGKLIECMAGKSAALHGEFQDATCFRTYPKQMKTGNKWIDHGGLKGWEERGGRYMTE
EEEAAQTEDDVVDYFGKTLLQAGYDYYGTESMYCGTLGTEIKTHIFVGCIFYQRLRHMVS
DKAQVRSTGPVDAITKQPVKGRKNRGGIRFGEMERDSLIAHGASALLQDRLMHCSDAHTA
YVCPKCGSILSASITSIGLTSKVQVSKCRLCDVKCKLVTIPYVLRYVANELASINVGIKL
HLSQLGVPIRL
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatttaatgtcaaccgtgtcagcgccgcccactcgcatgtggatagcttcaac
gctttcatcgaccattattcgaaacacgtggtgaagaggataccgccggtctacgtttct
gctgatgcggactatttgaagtaccttttcaacacttccgagaagccacactttaagttt
tcaatagatgtgcaaatatctgtgctttccttgcggatcgactatcccacccggccgagc
tcggagtgtctgggatcggacaccaggatgttccccagacatgccaagagcgcacatacg
acgtacgaggcgccactagtcgtgaaatttgggctaaaggtgcctggaatagatggcgtt
ttgacaaaggaaattgtcgtcgggttcctcccgatcatggtcaagtccaaacgctgcaat
ctcgacgggctctcgcccgaaggaatggtgcaacaaggggaggatgtggatgagactggc
gggtactttgtcatccgtggcaacgagaggatccttcgtcaacttatcgtactgcgttca
aactacccgctcgccataaaatcggaaaacaaccgcaacaagcatgcactgttcacggac
tacagtattatgatgcgaagccaatgttgcgacgacgggtgctccgtgagtaacattctc
tatctgacggtgaacaaacgttgcgtgttccgaactatcgtaaagagttccgtggttctc
attcctttcggcttgcttttgcgggcaacgatgccgtttatgagtgatgaagagctcaag
cgtaggctgctggaggatgcgttgggagacgttgagctgactgtctattaccaccgtttc
tttctcgacatgacagagagggacctcttgttgagtgacattgacttcaaggagaaccgg
tacctttataggctcggcagtgcgtgttggacccaaatacagcagtacatgcccccagga
gcgacatacgaagaatgtggagcatatttgttgcgcaactatgtgttgctgcaggcaaag
accaattcggagaagttcgatactctgatgtacatgttcaaaaagcttatcaaggtatct
agaggcgagacgcaaactgaaaactacgattcgtttgcgttccaggagttgctcttgccg
ggtcaaatttactcgtgcattctgaaagagagtttgtacgtggcactactgaaaatcagg
agtatttatcaagcagaacttattgaattgtgcaaaaatatcagtggcggtgctgccagg
agatccaaaagacaggtggttgagatggagctgggttcacatgaccccaagcagctcatg
cggcagttgctggaaagagcagagttgttcagttatgccgtagacaaagtcgcgcccgac
attacgaaaaagctgcattattttctggccacgggaaacgcaactaccacgcactttgaa
ctcccgcaaagctcggggctcactgttgttgctgaacgcatcaactaccatagatcggtt
caccgtggaagcatcttcgccaagatgaggtccactgaggtgcgcaaattgttgggtgag
acgtgggggttcatttgtccggttcacacgccagatggtgcaccgtgtggtctgctgtta
cacctgacgcaatatgcgattcccgtaacggatgccgattgcggaagtgccaccgatgcg
gtgaaatcttttttaagacaccaaggataccatgttgatttcaccggcaacgaggctgtg
tcgcagttttggcaatcaggtacaaatgacagcgggagaatccctgtgcttgttgacggt
attccagtctgtaatgtgcctatggcggatgctcacaggctctattgtgagattaaaagg
gccaaaaggaatgaaatttttggcctcaaacaacattacgaactggttgcgctgcctgac
tgcaagggccagtacactagccttatggttttgacataccctggtcgagtgataaggccc
gtgaggtgcgtaaagactggcatcatagaatggatagggccaattgcgcaactgtggtca
acgattgcggttaatgaagaggagttaaaactctcacacaagatattggacgaatccaaa
agccgcaagtcttcaaaagccctgtctacgtcagaagcgatcgaaaagtacaaagcaggt
agtatttctgagccaaaagaagggtccacgttggacaacgtgccggtaaaatacgaatac
gtggaagtatcgcctactgccatcctttctgtaacggctgccttaactcccttcagcaat
cacaaccagagcccaagaaacatgtatcagtgtcagatgttaaagcagagtatgggagtg
ccataccactgcgaacagttccgttccgatgtaaaggcgtacaggctgctgtttccccag
aagcctcttgttaccactgaggaatatcggaggatgaagtacgaagattatccgactggc
atgaacgcaattgtcgcagttatcgcacacactggattcgacatggaagacgccatgata
ataaacaagtcttcgttggaacgcggtgccttccacgggtgcatatataagacaaaagtc
atagactctatgcccccgaatgctaaaatgagagaaggacagtattatttcaacaacaca
aatcacttaggctctaagattatcccttcgttggacaaagacggtttgccaagtgtgggt
tcgagggtgaggaacggcactataatttgccgtgtggaagcgcgtgaaagaattgatggc
gggcatcacaccacggaccgagtcgaaaagtaccatgacgaagacgccgtggtagatcaa
gtaacaatgataggtgccagcgacgccaatgcggccgacagagcaggtgcatcaggtctc
aagtgcaatcgtgccaccataaaatttcgcatagtccgcaaccctatagttggggataag
tttgcgagtcgtcatggccaaaagggtatcctctcgatggcgtggcctgcggaggacatg
ccattcctcgaatcaggcatcacgcccgatatcatcttcaatccccacggtttgccgtca
cgcatgaccatcggcaagttgattgagtgtatggcaggaaagtcagccgcattgcacggt
gaattccaggatgccacctgctttaggacgtacccgaagcagatgaaaacgggcaacaaa
tggatcgatcacggtgggctgaaaggatgggaggaacgcggcggcagatacatgacggaa
gaggaggaagctgctcaaactgaagatgatgtggtcgactatttcggcaagacactcctg
caggcgggttacgattactacggcaccgaaagcatgtactgtggtaccctcggcactgaa
atcaagacgcacattttcgtcggctgcattttttatcaacgtctgcgtcacatggtttcg
gacaaagcccaagtgcgttccaccggaccggtagacgcaatcaccaagcaaccggtcaag
ggtcggaagaatcgtggaggcattcgtttcggtgaaatggaacgtgattctttaatagca
catggtgcgtctgcgttgttgcaggatcgtctgatgcactgctcggacgcccacacggcg
tacgtgtgtcccaagtgcggttccatcttgtctgcctcaatcacgtccatcggactgaca
agcaaggttcaggtgtccaagtgcagattgtgtgacgtcaagtgcaaactcgtgaccata
ccgtatgtgcttcgctatgtcgcaaatgagcttgcctcaataaacgttggaataaaactc
cacttgtcacaactcggagttcctatacgactgtga
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