Babesia bigemina: BBBOND_0402260
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Entry
BBBOND_0402260 CDS
T08062
Name
(RefSeq) DNA repair protein, putative
KO
K08737
DNA mismatch repair protein MSH6
Organism
bbig
Babesia bigemina
Pathway
bbig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BBBOND_0402260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbig03400
]
BBBOND_0402260
DNA repair and recombination proteins [BR:
bbig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BBBOND_0402260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
AAA_29
Motif
Other DBs
NCBI-GeneID:
24566278
NCBI-ProteinID:
XP_012769923
UniProt:
A0A061DCD7
LinkDB
All DBs
Position
IV:complement(499573..503682)
Genome browser
AA seq
1341 aa
AA seq
DB search
MQLGIKAYFATRPRTVSIGSNDTPSSDAQSGVAKDVVAPAAADNPSADPEVGKVVDVAKV
PSLSPSLRNSDPLKDEDALKRTYTCESVAPAEPRPDSIDTCRVSTSDASQQDAFDDGDES
PICRKRSLMFDNGFVPEKLKCTEITDEFIGAHLDVIEHFIAQSDTAGSYTAGTQGVLAGG
DASPETPKDCPTTTVSPNERTSSLSPADSAVAGVGTLGSLRASGTRPPDVDDEPGQGRRK
QARKGGRASSGKDEGAATKRVATQYVGHDGDVEELTFVDRREVEGGSAVATAGKLTVGSE
KFTACSQSVDCVTDEERKLYLTCPASQKSRCFKAYVEHYYRYNETFVFPPWVQIREIRDR
NGLRPTDESYDPSTLWVPSRSHRWAVAFRSCHFTECMQQWWYVKQDRFDQLLFFKMGRFY
ELFYHDACIVQEICGLRWMGSEAKPHVGFPEKSLHIYASACVARGYKVVVVEQTETPQQL
EQRNRETGQRQNTVSRAICEIITPGTITRPDMLGTQSKQLLLIAEAVVPPAATAPVAAEA
PTAHVGGTGDLAQPSTPTARAKTNPSFSNPSTLSSGRRNSRFGSRRRQTNEIKDLPGERL
LCICSMDASMGTIALGMVDISLGLGELRALVASVNPAEVVVDAATIGSLNELYGMTVYMG
FELTSFNCAHQFTPENVGNSDVKIAEVDYGAFEERAKAALGSSNAAYERLMLLLQRYLRS
VMLDNLLNYCAVKTLGADNYQYMTLDGAALTQLELFKSQEGDNSACLFGFLNKTCCPFGE
RMLRRWVLKPLMSAKRINARSRTVEFLSRNFSICSTYQEQLSLLPDLERSFGKVLNAAAG
CYKMAVYFDEGVFTKIYDLHLLLANFDRLQQHVSAFFSEAAEYGAECPSLLREMSSSVAK
VTGHCGELNARLNVTGLKTCSSRPGVWKESDEVRSRIDATKSRLDALLVEIQKTCPSACF
VHTKFRYEVELNERDHRRLSQSGKSLEITSTKAGHVRVRTSRIVSLVNELEEHEFALTQS
ELTFFQDAVRLLHDRRGVFSELLVTAAELDCLCSLASVAKHAVIPLVRPEVFERGSAEPY
MYLRASAHPVVSQLTPDSFVPNDIHLNHGDYGNLLLITGPNMGGKSTLLRQTALCAIMAQ
IGSFVPASECRMTAVDRIYTRLGASDNLMQGKSTFLVEMEEVSSILHTGTKDSLVLVDEL
GRGTSTFDATAIAAACLEKIDSIGCRCLFTTHFQEVCAYALRLPRVTLCHMTAAFDDEAR
TLTFLYKLAQGQCPESHGIHVARLAGIPPNVLEMAEKVSRRFRAQKRSPAATLGALLGAH
SRGDEAVLRALYEELRQPDGR
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcggcattaaagcttactttgcaacgcgcccgaggacggtgtctattggcagc
aacgacacaccgtcgtccgatgcgcagagcggcgtggctaaggatgttgttgctcccgcc
gctgccgacaacccttcagcggatccggaggtaggaaaggtcgtagatgttgcgaaggtg
ccgtcgttgtcgccatcactccgcaacagcgacccgctcaaggatgaagacgctctgaag
cgcacctacacgtgcgagagcgtcgcgcccgcagaaccgaggcccgattccatagacacc
tgccgggtgtcaacctcggacgcttcgcagcaggacgctttcgacgacggcgacgaatcg
cccatctgccgcaagcgcagcctgatgttcgacaacggcttcgtgcctgagaagctgaag
tgcaccgaaatcaccgacgagttcattggcgcccacctggatgttattgagcactttatc
gcccagagcgacactgccgggtcgtacacggctggaacccagggggtgctggccggaggc
gacgcctcgccggaaaccccaaaagactgcccaacgacgacggtgtcgcccaacgagcgg
accagctccttgagccccgctgatagcgctgtcgccggtgtgggcaccctgggctcactg
cgtgccagtggaacccggcctcccgacgtggacgacgagcccgggcagggtcggcgcaag
caggcgcgcaagggaggccgcgcgtcgtcggggaaggacgagggcgccgccacgaaacgt
gttgcaacgcagtacgtgggtcacgatggtgatgtggaggagttgaccttcgtggaccgc
cgcgaggtggagggaggctcggcagtcgccacagcaggcaagctcaccgtgggctccgag
aagttcaccgcgtgctcccagagcgtggactgcgtcaccgatgaggagcgcaagctgtac
ctgacgtgcccggccagccagaagagccggtgtttcaaggcatacgtggagcactactac
cgctacaacgagactttcgtgttcccgccgtgggtgcagatccgcgagatccgtgaccgc
aacggcctgcgccccacggacgagtcgtatgacccgagcacgctgtgggtcccctcgcgc
agccaccgttgggccgtcgccttccgcagctgccacttcaccgagtgcatgcagcagtgg
tggtacgtgaagcaggaccgcttcgaccagctgctgtttttcaagatgggtcgtttctac
gagctgttttaccacgacgcgtgcatcgtgcaggagatttgcggcctgcgttggatgggc
tcggaggcgaagccgcacgtgggcttcccggagaagagcttgcacatctacgcgtccgcc
tgcgtcgcaagggggtacaaggtggtggtggtggagcagacagaaacccctcagcagctg
gagcagcgcaaccgcgaaaccgggcagcgccagaacaccgtctctcgtgctatatgcgag
atcatcacaccgggcaccatcactcgccctgacatgttgggcacgcaatccaagcagctg
ctgctgatcgcggaagccgtggtgccgccggctgcgacagccccggttgcagcggaggcg
ccgacagcgcatgtgggtggcacgggtgaccttgcgcagccctcaacccccactgcccgt
gctaaaacgaacccgagcttttcaaacccatcgacgctctcctcggggcgtaggaacagc
cgctttggctccaggcggcgccaaaccaacgagatcaaggacttgccaggtgagcgcctt
ctgtgcatctgttcgatggacgcctccatgggaacgattgcgctggggatggtggacatt
tccctgggtttgggggagctgcgggcgctcgtcgcgtcggtgaacccggccgaggtcgtt
gtcgacgccgccaccataggttcgctgaatgagctgtacggcatgacggtgtacatgggc
ttcgagctgacgtccttcaactgcgcgcaccagttcaccccggaaaacgttggcaatagc
gacgtcaagatcgccgaggtcgactacggcgccttcgaggagcgcgcgaaggctgccctc
ggcagcagcaacgccgcttacgagaggctgatgctgctactgcagcgctacctgcgctca
gtgatgctggacaacctgctgaactactgcgcagtcaagacgctgggcgccgacaactac
cagtacatgaccctggacggggccgccctcacccagttggagctgttcaagtcccaggag
ggcgacaactcggcgtgcctgttcggattcctgaacaagacatgctgccccttcggcgag
cgcatgctgcggcgctgggtgctcaagcccctgatgagcgcgaagcgcataaatgcccgc
agccggacggtggaattcctgagccgcaacttctccatttgcagcacctaccaggagcag
ctgtcgttgctccccgacctcgagcgctccttcggcaaggtgctcaatgccgccgcgggg
tgctacaagatggcggtgtacttcgacgagggcgtcttcaccaagatctacgatctgcac
ctgctgctcgccaacttcgaccggctgcagcagcacgtgtcggccttcttctccgaggct
gcggagtacggcgcggagtgcccgtcgctgctcagggaaatgtcctccagcgtcgccaag
gtgactggccactgcggagagctgaacgcgcgtctgaacgtcaccggcctgaagacgtgc
agcagccgccccggcgtctggaaggaatccgacgaagtccgcagccgcattgacgccacg
aagtcgcgtttggacgcgctgcttgtggaaattcagaagacctgcccgtccgcttgcttc
gtgcacacgaagttccgttacgaggtcgagctcaacgaacgcgaccaccgccgcctctcc
caaagcgggaagtcgctcgagataacctccacaaaggcggggcacgtgcgcgtgcgcacc
agccgcatagtatcgctcgtgaacgagctggaggagcacgaattcgcgctgacgcagagc
gagctcacgttcttccaggatgcggtgcggctgctgcacgaccgccgcggcgtgttcagc
gaactgctggtgaccgccgcggagctggactgtctgtgcagcctcgcgtcagtggccaag
cacgcggtgataccgttggtgcggcctgaggttttcgagcgcggctccgccgagccgtac
atgtatctgcgtgcaagcgcccaccccgtggtctcccaactcacccccgactccttcgtg
cccaacgacatccatctgaaccacggggactacggcaatctgctgctcatcaccgggccc
aacatgggcggcaagtcgaccctgctgcgtcagaccgcgctgtgtgccataatggcacag
atcggctcttttgtgcctgcgtccgagtgcaggatgacagcggtggaccgcatctacact
cgcctaggagcgtccgacaacctcatgcagggcaagagcaccttcttggtggagatggag
gaggtgtcgtcgatattgcatacgggcacaaaggactccctggtgctcgtcgacgagctg
ggcaggggcacctccacgtttgacgccacggccatagctgccgcgtgcctggagaagatc
gactccatcgggtgccgctgcctgttcacgacccacttccaggaggtctgcgcgtacgcg
ctgcggctacccagggtcacgctgtgccacatgacggcggccttcgacgacgaggcgcgt
acgctgaccttcctgtacaagctggcgcaggggcagtgccccgagtcgcacggcatccac
gtcgcccgcctcgccgggatcccacccaacgtcctcgagatggcggagaaggtctccagg
cgcttccgcgcgcagaagcgctcgcccgccgccacgttgggggcgctgttaggcgcacac
tcccgcggcgacgaggccgtgctgcgggcactatacgaggagctgcggcaaccggatgga
cggtga
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