Bison bison bison (American bison): 104995084
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Entry
104995084 CDS
T08726
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
bbis
Bison bison bison (American bison)
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbis03016
]
104995084 (CDKAL1)
Enzymes [BR:
bbis01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
104995084 (CDKAL1)
Transfer RNA biogenesis [BR:
bbis03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
104995084 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
104995084
NCBI-ProteinID:
XP_010847126
Ensembl:
ENSBBBG00000011576
UniProt:
A0A6P3HWZ5
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MPSASCDTFLNDIEDIVSQEDSKPQERHFSRKHVVPKVRRRNTQKYLQEENSPPSDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVDR
AKQSFQEGVCEIWLTSEDTGAYGRDIGSSLPALLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILHHPRVYAFLHIPVQSASDTVLMEMKREYCVADFKRVVDFLKDKVPGITIATD
IICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRTKELS
RIFHSYNPYDHKIGQRQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPTFMGKMVEVDIYE
SGKHFMKGQPVSDAKVYTPSISKPLARGEVSGLTEEFRNRLGNHLNSVPHTSAANRRESA
SSRMVLRLQRLHQDFALKMSVGLALFALLFALLVKVYN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcatcctgtgatacattcctgaatgacatagaagatattgtgtcgcaagaa
gattcaaagccgcaagagaggcatttttcgagaaagcacgttgttccaaaggtgcgaagg
cgaaatacccaaaagtatctgcaagaggaaaacagtccaccgagtgatagcactattcca
ggcatacagaaaatttggatacgaacttggggttgttctcataataattcagatggagaa
tacatggctggacaactggctgcttatggatataaaattacagaaaatgcatcagatgca
gacttatggctcctgaatagttgtactgtaaaaaatccagctgaagaccactttagaaac
tcaattaaaaaagctcaagaggagaacaagaaaatagtgcttgctggctgtgttcctcaa
gcccagcctcgtcaggattacctcaaagggctgagcatcatcggggttcaacagatagat
cgtgtagtagaagttgtggaggaaacaattaaaggtcactctgtgagactgttgggtcag
aaaaaggataatggaaaacgtttggggggagcacgactggatttgccaaagattaggaag
aatccactcatcgaaatcatttccatcaatactgggtgtctcaatgcttgtacctactgc
aaaactaaacatgccagaggaaatttggccagttacccaattgatgaattagtagataga
gccaaacaatcttttcaagagggtgtttgtgagatatggttgaccagtgaagacacgggg
gcttacggcagagatattggctccagcctcccggccctgctgtggaagctggttgaagtg
attcctgagggagcgatgctgaggctgggcatgaccaatccaccctatattttagagcac
ctggaggaaatggcaaaaatccttcatcacccccgagtctatgcttttctgcacatacca
gttcagtctgcctctgacactgtgctcatggaaatgaaaagagaatactgtgtggctgac
ttcaaaagagtggtggattttctgaaagacaaagttcctggaataactattgctacagat
attatctgtggttttcctggagaaacagaccaagattttcaagaaacagtgaaacttgtt
gaagagtacaaatttccaagtctctttattaaccagttttacccaagaccaggaactcct
gctgcaaaaatggaacaagttccagcacaagtgaaaaaacaaagaacaaaagagctctct
cggatatttcattcgtacaatccatacgatcacaagattggtcagagacaacaagtgtta
gtcacagaagaatcttttgattccaagttttatgttgcacacaatcgattctacgagcag
gttttagtgccaaagaaccccacattcatggggaaaatggtcgaagtggacatttatgaa
tcaggaaaacattttatgaaggggcagccagtttcagacgcgaaagtatacacaccatcc
atcagcaaaccattagcaagaggagaagtctcgggtttaacagaggaattcagaaatagg
cttgggaatcacctgaattcagtaccccacacctcagctgcaaatcgacgagagtcggcc
agttcccgaatggtgctacgattgcaaagactacaccaggactttgcactgaagatgtct
gtgggcctggctctgtttgctcttctttttgcgcttttggtcaaggtctataattaa
DBGET
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