Bison bison bison (American bison): 105004573
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Entry
105004573 CDS
T08726
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105004573 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbis03021
]
105004573 (POLR1A)
Enzymes [BR:
bbis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105004573 (POLR1A)
Transcription machinery [BR:
bbis03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105004573 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
105004573
NCBI-ProteinID:
XP_010860508
Ensembl:
ENSBBBG00000007513
UniProt:
A0A6P3J1Q6
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFTNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVVHLL
LCQLRVLEVGALQAVYELERILYRFLEENADPTACEIQEELEQYTIKILQNNLPGSQGAQ
VKNVCESRSKLISVFWKVHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRRADQKDS
EPQGIEEAQMGKRGYLTPSSAQEHLIALWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPSEVAAPTT
EEEKDSWMAMDRSFLSQLPGQSLTDRLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSASDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARVLPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFNREQYMELVYRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKIGGKAWVKES
PQLVPGFNPDSMCESQVIIRAGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVRRHGIIEDSTHCGPRAVRAALNLPEAVSCD
EVQGKWQDAHLSKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLTSNYEVIMKTKHLHEVLSRADPQKALRHFRAIKKWHSKHS
NTLLRKGAFLNYSQKIQAAVKALNLEGTNQNGRSPETCQMLRMWAELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKMDDYSCEWAAQAERSYEKSGLSLDSLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIK
TPMMSVPVFNTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFCIGEKQNKFRVYQLRFQ
FLPHAYYQQEKCTRPEDILHFMETRFFKILMEAIRKKNSKASAFRNVNTRRATQRDLDNA
GESERNRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYDSEEEEEKEEEEK
EEEDIQEEGTSLKEGVQQEQEEGGWAPEESSLPGAPRPQPQKRARSREPQGAEAVERRAQ
AVRECHPFIEDYQYDTQGSLWCQVTLKLPLMKVNFDMSSLVASLAQGAVIYATKGITRCL
LNETTNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVIEK
EIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQ
ATLMGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagaactgaagaaattaagcgtgaagtccattacgaaccctcggtacctggac
agcctggggaacccctcggtaaatggcctgtatgatttagctctgggccccgccgactcc
aaagaggtgtgctccacctgcgtgcaggacttcaccaactgctctgggcacttgggccac
atcgacctcccactcaccgtgtacaaccctctcctcttcgataaactctaccttttgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtggttcacctctta
ctgtgccagctgagagtcctggaagttggggccctgcaagcagtgtatgagctggagaga
attctctacaggtttctggaagaaaatgctgatcctactgcctgtgaaattcaggaagag
ctagagcaatatacaatcaaaatcctgcagaacaacctcccaggatcccagggtgcacaa
gtgaaaaatgtctgtgagagcaggagcaaactcatctctgtcttctggaaggtacatatg
actgctaagagatgtccccactgcaaaacggggcggtcagtggtccggaaggagcacaat
agcaaactgaccatcacgtacccggccatggtgcacaggagagctgaccagaaggacagc
gagccccagggaattgaggaagctcagatgggaaaacgaggatacctgacaccctccagt
gctcaagaacatctcatagctctttggaaaaatgaagggttcttcctgaattaccttttt
ttgggactggaagatgttggcatggagtccaggttcaaccccagtatgttctttctggat
ttcttggtggtaccaccctcaaggtatcgccctgtcaaccgccttggggaccagatgttc
accaacgggcagacggtgaacttgcaggctgtcatgaaggacgtggttctgatccgaaag
cttctggcactgatggcccaagaacaggagctgccaagtgaggtggcagcacccaccaca
gaagaggaaaaagactcttggatggctatggaccgatcttttttgagtcagcttccaggc
cagtccctcacagacagactttacaacatttggattcgccttcagagccacgttaatatt
gtgtttgatagcgagatggacaaattaatgatggaaaagtaccccggcattagacagatc
ctggagaagaaggatggtttgttccgaaagcacatgatggggaagcgcgtagactacgca
gcccgctcggtcatctgcccggacatgtacatcaacaccaatgaaattggaattcccatg
gtgtttgccacaaagctgacctaccctcaaccagtcaccccctggaatgttcaggaactg
aggcaggcggtcatcaacggccccaacgtgcaccctggagcctctatggtcatcaatgag
gatggcagtcgcacagccctgagcgcttcagacctcacgcagcgggaggcagtggccaaa
cagctcctgacaccagctacgggggcccctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacattctcctcctgaaccggcagcccaccctgcacaggccctcc
atccaggcgcatcgcgcccgcgtcctccccgaggagaaagtcctgcggctccactatgcc
aactgcaaggcctacaacgccgacttcgatggagatgagatgaacgcccactttccccag
agtgaactgggccgggccgaggcctacgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccagccattggcggggctgatccaagatcacatggtttcaggagcaaac
atgaccattcgaggctgctttttcaaccgggagcagtatatggagctggtgtaccgagga
ctcacagacaaagtggggcgtgtgaagctctttcctcctgccatcctgaagccctttcct
ctgtggacaggaaagcaggtcgtgtccacattgctcatcaacataatcccagaggaccat
atccccctgaacttgtcaggaaaggcgaagatcggtggaaaggcctgggtgaaggagtct
cctcagctcgttcccggctttaaccccgactccatgtgcgagtcccaggtgatcatcaga
gcaggggaactgctgtgcggggtgctggacaaggcgcactacggaagctccgcctacggc
ctggtccactgctgctacgagatctacggtggggagaccagcggcagggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcaccttaggagtagaa
gacattttggtcaagccgaaggcggatgtcaggagacatgggatcattgaagactccacc
cactgtgggccccgggccgtcagggctgcgttaaacctgccagaggcagtgtcatgtgat
gaagtccaagggaagtggcaggatgcccatctgagtaaagatcagagggattttaacatg
attgacttgaagttcaaggaggaagtgaaccattacagcaatgaaattaacaaggcatgc
atgcccttcggcctacacagacagttcccagagaacaatctgcagatgatggtacagtct
ggagccaaaggttcaacagtgaacaccatgcagatttcgtgcctgctgggccagatcgaa
ttggaaggtcggagacccccgctcatggcatctggcaagtcgttgccctgcttcgagcct
tatgaattcacccccagggctggtggcttcgtgactggcaggttcctcactggcatcaag
cctccggagttcttcttccactgcatggccggccgagagggtctggtggacactgctgtg
aagaccagccgttccggatacctccagaggtgcatcatcaaacacctggaggggctggtt
gtccaatacgacctgacagtccgcgacagtgatggcagcgtggtgcagttcctgtacggg
gaggacggcctggacatccccaagacacagttcctgcagcctaagcagttccccttcctc
accagcaactatgaggtaataatgaaaacgaagcatctccatgaagttttatccagagcg
gatccccagaaagctctccgtcatttcagagccatcaaaaaatggcacagcaagcattcc
aacaccctcctgaggaaaggcgccttcttgaattactcccagaaaattcaggcagctgtg
aaagccttgaaccttgagggcacaaaccagaacggccgcagccccgagacttgccagatg
ctgaggatgtgggctgagttagacgaacaaagccggaggaagtaccagaagaaggcggct
ccttgtcccgaccccagtctgtctgtctggcgcccagacatctacttcgcatctgtgtca
gaaacatttgaaaagaagatggacgactacagctgcgagtgggcagctcaggcagagcgg
agttacgagaaatcggggctttctctcgacagtttgaggactctgctgcagctcaagtgg
cagcgctctctatgcgacccgggtgaggccgtgggcctgctggccgcccagagcatcggg
gagccctccacacagatgacgctcaacaccttccactttgccggcagaggcgagatgaac
gtcaccctgggcattccgaggttgcgggagatcctcatggtggccagttccaacatcaag
acgccgatgatgagtgtacctgtgttcaataccaagaaagcactgaagaaagtgaaaagc
ctgaagaagcaactcaccagagtgtgtctcggggaggtgttggagaaaattgatgtccag
gagtccttctgtataggggagaaacagaacaagttccgggtataccagctgcggtttcag
ttcctgccacatgcgtactaccagcaggagaagtgcacgaggcccgaggacatcttacac
ttcatggaaaccagattctttaaaattctgatggaagccatcaggaagaagaacagcaaa
gcatcagctttcagaaatgtgaacacgcggagagccacccagcgggatctagacaatgct
ggcgagtccgagaggaatcggggagagcaggagggcgacgaggaagaggaggggcacatt
gtggacgctgaagctgaggagggagatgctgacgcctcagatgccaaacgcaaggaaaaa
caagaggaggaggtcgactatgacagcgaggaggaggaggagaaggaggaagaggagaag
gaggaagaggacattcaggaggaagggaccagcctcaaagaaggcgttcagcaggagcag
gaggaaggcggctgggcccccgaggagagctcgctccccggtgccccccggccccagccg
cagaagcgcgcccgaagccgggagccccagggggccgaggcggtggagcgccgggcacag
gcggtgcgcgagtgccatccgttcatagaggactaccagtatgacacacagggcagcctg
tggtgccaggtgacgctgaagctccctctcatgaaagtcaactttgacatgagctccctg
gtagcgtccttggcccaaggagccgtcatctatgcaaccaagggtatcacaaggtgcctc
ctgaatgagaccaccaacagtaagaatgagaaggagcttgtcttaaacacagaaggcatc
aacctcccggagctgttcaagtacgccgaggtcctagatctgcgccgtctctattccaat
gacatccatgccatggccagcacgtacggcatcgaggccgcactgcgcgtgattgaaaag
gagatcaaggacgtgtttgccgtatacggcatcgccgttgacccccgccacctctcgctg
gtggctgactacatgtgcttcgagggtgtttacaagccactgaaccgctttgggatccgg
tcaaactcctcgccactgcagcagatgacatttgagaccagcttccagtttctgaagcag
gccaccctcatgggatcccatgacgaactgaggtccccatcagcctgcctcgtggtcggg
aaggtcgtcaagggtgggaccggcctcttcgagctcaagcagccactaagatag
DBGET
integrated database retrieval system
