KEGG   Babesia bovis: BBOV_III006040
Entry
BBOV_III006040    CDS       T01085                                 
Name
(RefSeq) RNA polymerase Rpb4 family protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
bbo  Babesia bovis
Pathway
bbo03020  RNA polymerase
bbo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BBOV_III006040
  09124 Replication and repair
   03420 Nucleotide excision repair
    BBOV_III006040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbo03021]
    BBOV_III006040
   03400 DNA repair and recombination proteins [BR:bbo03400]
    BBOV_III006040
Transcription machinery [BR:bbo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     BBOV_III006040
DNA repair and recombination proteins [BR:bbo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      BBOV_III006040
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 5479984
NCBI-ProteinID: XP_001611733
UniProt: A7ANN1
LinkDB
Position
3:1300993..1301783
AA seq 129 aa
MDTWKEYNQVEVDEELKNAKCLNLCELHLILGDQLRLQHKRNENAKQLIKTSHEYASRFA
ILKFRSAIVDIRTTIEREGSLHEFEMASVVNLLPKSVDEAKSLIPSLWRIPDERIDDILE
LLEGYRAQS
NT seq 390 nt   +upstreamnt  +downstreamnt
atggatacgtggaaggaatataatcaggttgaggtggacgaggaactgaagaatgccaaa
tgcctcaacttatgtgagctacaccttattttgggtgatcaactacgcctgcaacacaaa
agaaatgaaaacgctaaacagttaatcaagacatctcacgaatatgcaagcagatttgcc
atattaaagtttagaagtgctattgtagatattagaacaaccatcgaacgagaagggtct
ttgcacgaatttgagatggccagcgtggtaaatctgctgcccaaatcagtggatgaagca
aagtcactcataccgtcactctggcgcattccagatgaacgtattgacgacatactggaa
ttgctagagggatacagagctcagtcgtga

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