Bradyrhizobium brasilense: QA636_22880
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Entry
QA636_22880 CDS
T09107
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bbra
Bradyrhizobium brasilense
Brite
KEGG Orthology (KO) [BR:
bbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbra03009
]
QA636_22880 (rimO)
Enzymes [BR:
bbra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QA636_22880 (rimO)
Ribosome biogenesis [BR:
bbra03009
]
Prokaryotic type
ribosomal protein modification factors
QA636_22880 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WFU60407
LinkDB
All DBs
Position
4845886..4847211
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AA seq
441 aa
AA seq
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MQEAAAPKVSFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQ
ESLAAIGEAMAENGKVIVTGCMGAEPEQIESAYPGVLSITGPQQYESVLDAVHRALPPAH
NPHIDLVPPQGVKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPANDVLREAEKLV
KAGVKELLVISQDTSAYGVDLKYAESPWQDRSVRAKFFDLAKELGELGAWVRLQYVYPYP
HVDEVIGLMTEGKVLPYLDIPFQHASPDVLRAMKRPAAQEKTLARIQKWREQSPELTLRS
TFIVGFPGETDSDFAYLLDWLDEAEIDRLGCFKYEPVAGAASNAIGNAVPDEIKQERWNA
LMARQQKISARRLKRKVGTRQQVIIDEVGPTVAKGRSKADAPEIDGAVYLTSRRPLKVGE
IVTAKIERSDQYDLHGSVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggccgccgcgccgaaagtgagctttgtgtccttggggtgccccaaggcgctg
gtcgattccgagcgcatcatcacccggctgcgcgcggaaggctatgagctggcgcgcaag
catgacggcgccgacatcgtcatcgtcaacacctgcggcttcctcgacagcgccaagcag
gaatcgctcgccgcgatcggcgaggccatggccgagaacggcaaggtcatcgtcaccggc
tgcatgggtgccgaaccggagcagatcgagagcgcctatcccggcgtgctctcgatcacg
gggccgcagcaatatgagagcgtgctggacgccgtgcatcgggcgctgccgccggcgcac
aacccgcatatcgacctggtgccgcctcagggcgtcaagctgacgccgcggcactacgcg
tatttgaagatatccgaaggctgcaacaaccgctgcagcttctgcatcatcccgaagctg
cgcggcgatctggtgtcgcggccggccaatgacgtgctgcgcgaggccgagaagctggtg
aaggccggcgtcaaggaattgctcgtcatctcgcaggacacctcggcttatggcgtcgac
ctgaaatacgccgagagcccgtggcaggaccgcagcgtccgcgcaaaattcttcgatctc
gccaaggagctcggtgagctcggcgcctgggtgcggctgcaatatgtctacccctacccg
catgtcgacgaggtcatcggcctgatgaccgagggcaaggtgctgccctatctcgacatc
ccgttccagcatgcgagccctgacgtgctgcgcgcgatgaagcgcccggctgcgcaggag
aagacgttggcgcggatccagaagtggcgcgagcagagccccgagctgacgctgcgctcg
accttcatcgtcggtttccccggcgagaccgattccgatttcgcctatctgctcgactgg
ctcgatgaagcggaaatcgatcgcctcggctgcttcaaatacgagccggttgccggtgcc
gcgtcgaacgcgattggcaatgccgtacccgacgagatcaagcaggagcgctggaatgcg
ctgatggcgcggcagcagaagatctccgcgaggcgcctcaagcgcaaggtcggcacccgc
cagcaggtcatcatcgacgaggttggccccacggtggcgaagggccggtcaaaggccgat
gcgcccgagatcgacggcgccgtctacctcaccagccgccgcccgctgaaggtcggcgag
atcgtgaccgccaagatcgagcgctccgaccagtacgacctgcacggcagcgtcgccgga
ttctag
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